RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ERCC1P07992 297 aaPredicted RBP6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 PATE4P0C8F1 98 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 FAHP16930 419 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 HRH1P35367 487 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 RFC3P40938 356 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 CARD18P57730 90 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 RAC3P60763 192 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 CXADRP78310 365 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 DHODHQ02127 395 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 UBE2V2Q15819 145 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 CLVS2Q5SYC1 327 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 PLXDC2Q6UX71 529 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 PNPLA2Q96AD5 504 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 GPER1Q99527 375 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 EDEM2Q9BV94 578 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 ZNF407Q9C0G0 2248 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 ALX4Q9H161 411 aaPredicted RBP6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 PLEK2Q9NYT0 353 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 ZNF230Q9UIE0 474 aaPredicted RBP6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 FLVCR1Q9Y5Y0 555 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 DNAJC13O75165 2243 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 ZNF716A6NP11 495 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 LEUTXA8MZ59 168 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 B8ZZF3 427 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 MCRIP1C9JLW8 97 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 RAD51DO75771 328 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 HPP00738 406 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 ICAM2P13598 275 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 NFYAP23511 347 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 OTX1P32242 354 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 CD96P40200 585 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 CAPZA1P52907 286 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 HGFACQ04756 655 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 OPCMLQ14982 345 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 RNASE10Q5GAN6 216 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 LY6G6FQ5SQ64 297 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 SFRP5Q5T4F7 317 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 CDH26Q8IXH8 852 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 RADILQ96JH8 1075 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 ALKBH3Q96Q83 286 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 SLC25A21Q9BQT8 299 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 MS4A5Q9H3V2 200 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 CRLF2Q9HC73 371 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 B3GNT2Q9NY97 397 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 ZNF224Q9NZL3 707 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 FBLN5Q9UBX5 448 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 KCNN3Q9UGI6 736 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 FRYQ5TBA9 3013 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 RPS10-NUDT3A0A1W2PQS6 291 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 OR2AT4A6NND4 320 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 F5H5P2 479 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 M0R135 149 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 M0R233 179 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 ARPC5O15511 151 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 CRTAPO75718 401 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 PMP2P02689 132 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 NR2C1P13056 603 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 CASRP41180 1078 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 OR3A3P47888 321 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 CYB561P49447 251 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 DHRS2Q13268 280 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 KISS1Q15726 138 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 FAM27BQ5VT28 67 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 OR10K1Q8NGX5 313 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 OR10D3Q8NH80 312 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 OR2AE1Q8NHA4 323 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 ZNF799Q96GE5 643 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 ZNF845Q96IR2 970 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 THOC3Q96J01 351 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 ADGRG7Q96K78 797 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 SFXN2Q96NB2 322 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 HES7Q9BYE0 225 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 CLEC4MQ9H2X3 399 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 FN3KRPQ9HA64 309 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 UPB1Q9UBR1 384 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 ZNF107Q9UII5 783 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 SPENQ96T58 3664 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 GJE1A6NN92 205 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 STMND1H3BQB6 276 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 H3BUI4 141 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 L7N2F9 121 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 M0R296 226 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 NOS1APO75052 506 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 RGS11O94810 467 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 SERPINA7P05543 415 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 ZNF883P0CG24 379 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 CD59P13987 128 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 POU3F2P20265 443 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 GDF1P27539 372 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 HOXC12P31275 282 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 RGS19P49795 217 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 FOXO1Q12778 655 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 C11orf88Q6PI97 169 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 C12orf45Q8N5I9 185 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 KCNG3Q8TAE7 436 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 PPP1R35Q8TAP8 253 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 FGFBP3Q8TAT2 258 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 RAB3CQ96E17 227 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 ARHGAP5-AS1Q96IT6 56 aa6.97□□□□□ -1.29
PDLIM5-204ENST00000380176 SIGLEC12Q96PQ1 595 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms