RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 ZFPL1O95159 310 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 FAHP16930 419 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 GIFP27352 417 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 GATA4P43694 442 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 BDH1Q02338 343 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 MAB21L1Q13394 359 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 CDK5R1Q15078 307 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 CARTPTQ16568 116 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 CLVS2Q5SYC1 327 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 TGIF2LYQ8IUE0 185 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 ZDHHC23Q8IYP9 409 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 RPS4Y2Q8TD47 263 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 C10orf105Q8TEF2 133 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 PP6455Q8WZ26 134 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 PIGCQ92535 297 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 HPS1Q92902 700 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 SMIM19Q96E16 107 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 TECTBQ96PL2 329 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 RTL8AQ9BWD3 113 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 CCDC90BQ9GZT6 254 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 GCM1Q9NP62 436 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 ERVK-18Q9QC07 812 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 LRRC42Q9Y546 428 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 ARID1AO14497 2285 aa10.09□□□□□ -0.79
PCNA-201ENST00000379143 PRRC2AP48634 2157 aaKnown RBP10.09□□□□□ -0.79
PCNA-201ENST00000379143 TMEM210A6NLX4 147 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 LRRC30A6NM36 301 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 ZNF850A8MQ14 1090 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 CLDN25C9JDP6 229 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 OGG1O15527 345 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 CDC14BO60729 498 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 RP2O75695 350 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 GATBO75879 557 aaKnown RBP10.08□□□□□ -0.8
PCNA-201ENST00000379143 PTBP3O95758 552 aaKnown RBP10.08□□□□□ -0.8
PCNA-201ENST00000379143 SERPINA3P01011 423 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 NRASP01111 189 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 COL8A2P25067 703 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 GTF2A1P52655 376 aaPredicted RBP10.08□□□□□ -0.8
PCNA-201ENST00000379143 ACSM1Q08AH1 577 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 RIN1Q13671 783 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 IRF3Q14653 427 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 SPHARQ15513 63 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 ZNF181Q2M3W8 571 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 CEACAM21Q3KPI0 293 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 TMEM42Q69YG0 159 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 PEG10Q86TG7 708 aaKnown RBP10.08□□□□□ -0.8
PCNA-201ENST00000379143 RDH10Q8IZV5 341 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 C1orf87Q8N0U7 546 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 OR5A2Q8NGI9 324 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 OR5P3Q8WZ94 311 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 CCL17Q92583 94 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 YIPF5Q969M3 257 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 ITPKCQ96DU7 683 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 TIMD4Q96H15 378 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 FN3KRPQ9HA64 309 aa10.08□□□□□ -0.8
PCNA-201ENST00000379143 ZNF275Q9NSD4 429 aaPredicted RBP10.08□□□□□ -0.8
PCNA-201ENST00000379143 CHD3Q12873 2000 aaKnown RBP10.08□□□□□ -0.8
PCNA-201ENST00000379143 IGHV4-30-2A0A087WSY4 118 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 LOC100289279A0A1B0GTE1 492 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 OR5B21A6NL26 309 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 VWC2LB2RUY7 222 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 LYNX1G3V0Z9 82 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 CD1AP06126 327 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 LYNX1P0DP58 116 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 IRF2P14316 349 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 ZNF20P17024 532 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 NR4A2P43354 598 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 GPR6P46095 362 aaPredicted RBP10.07□□□□□ -0.8
PCNA-201ENST00000379143 MED22Q15528 200 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 PLCXD3Q63HM9 321 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 DMKNQ6E0U4 476 aaPredicted RBP10.07□□□□□ -0.8
PCNA-201ENST00000379143 XAF1Q6GPH4 301 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 OR13C3Q8NGS6 347 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 OR11L1Q8NGX0 322 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 GPR148Q8TDV2 347 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 SGCDQ92629 289 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 RAB1CQ92928 201 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 RNF170Q96K19 258 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 PDCD1LG2Q9BQ51 273 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 TMEM106BQ9NUM4 274 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 TANC2Q9HCD6 1990 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 ANKRD61A6NGH8 418 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 PPIHO43447 177 aaKnown RBP10.07□□□□□ -0.8
PCNA-201ENST00000379143 PLPP2O43688 288 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 LALBAP00709 142 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 MT-ND2P03891 347 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 CD2P06729 351 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 GRPP07492 148 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 HOXB4P17483 251 aaPredicted RBP10.07□□□□□ -0.8
PCNA-201ENST00000379143 GNG3P63215 75 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 CNN3Q15417 329 aaKnown RBP10.07□□□□□ -0.8
PCNA-201ENST00000379143 TBCEQ15813 527 aaPredicted RBP10.07□□□□□ -0.8
PCNA-201ENST00000379143 SPRNQ5BIV9 151 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 YIF1BQ5BJH7 314 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 FAM76BQ5HYJ3 339 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 CEP78Q5JTW2 689 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 KCTD8Q6ZWB6 473 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 MOB3CQ70IA8 216 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 UTS2BQ765I0 119 aa10.07□□□□□ -0.8
PCNA-201ENST00000379143 MOGAT3Q86VF5 341 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms