RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 CLDN23Q96B33 292 aa12.04□□□□□ -0.48
HIPK3-202ENST00000379016 KTI12Q96EK9 354 aaPredicted RBP12.04□□□□□ -0.48
HIPK3-202ENST00000379016 SIGLEC10Q96LC7 697 aa12.04□□□□□ -0.48
HIPK3-202ENST00000379016 ACHEP22303 614 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 TEAD1P28347 426 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 KIR3DL2P43630 455 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 SMAGPQ0VAQ4 97 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 RNF113BQ8IZP6 322 aaKnown RBP12.03□□□□□ -0.48
HIPK3-202ENST00000379016 MEGF10Q96KG7 1140 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 MYOZ1Q9NP98 299 aaPredicted RBP12.03□□□□□ -0.48
HIPK3-202ENST00000379016 M0R143 59 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 GPRIN2O60269 458 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 HNRNPA1L2Q32P51 320 aaKnown RBP12.03□□□□□ -0.48
HIPK3-202ENST00000379016 C5orf46Q6UWT4 87 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 OR2L13Q8N349 312 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 GPR26Q8NDV2 337 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 AMMECR1Q9Y4X0 333 aaPredicted RBP12.03□□□□□ -0.48
HIPK3-202ENST00000379016 A0A1W2PR80 420 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 SLC22A20A6NK97 555 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 B4GALT3O60512 393 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 TSPAN12O95859 305 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 IVDP26440 423 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 CEACAM6P40199 344 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 TSPAN31Q12999 210 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 SMN1Q16637 294 aaKnown RBP12.03□□□□□ -0.48
HIPK3-202ENST00000379016 C1orf140Q5VVS0 124 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 FGF13Q92913 245 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 OR2A14Q96R47 310 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 TMUB1Q9BVT8 246 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 VWDEQ8N2E2 1590 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 A6NDN8 102 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 B4E171 279 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 SPRY1O43609 319 aaPredicted RBP12.03□□□□□ -0.48
HIPK3-202ENST00000379016 AOAHP28039 575 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 PDCD1Q15116 288 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 TAS1R1Q7RTX1 841 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 PDPNQ86YL7 162 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 RBM45Q8IUH3 476 aaKnown RBP12.03□□□□□ -0.48
HIPK3-202ENST00000379016 FZD6O60353 706 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 HTR1FP30939 366 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 MTNR1BP49286 362 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 FAAP20Q6NZ36 180 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 GPR84Q9NQS5 396 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 TBL2Q9Y4P3 447 aaKnown RBP12.03□□□□□ -0.48
HIPK3-202ENST00000379016 MED19A0JLT2 244 aaPredicted RBP12.03□□□□□ -0.48
HIPK3-202ENST00000379016 POM121BA6NF01 834 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 HLA-GP17693 338 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 LGALSLQ3ZCW2 172 aaPredicted RBP12.03□□□□□ -0.48
HIPK3-202ENST00000379016 SOWAHCQ53LP3 525 aaPredicted RBP12.03□□□□□ -0.48
HIPK3-202ENST00000379016 CNOT2Q9NZN8 540 aaKnown RBP12.03□□□□□ -0.48
HIPK3-202ENST00000379016 HSPB8Q9UJY1 196 aa12.03□□□□□ -0.48
HIPK3-202ENST00000379016 SARAFQ96BY9 339 aa12.02□□□□□ -0.48
HIPK3-202ENST00000379016 C8orf44Q96CB5 159 aa12.02□□□□□ -0.48
HIPK3-202ENST00000379016 SEC11CQ9BY50 192 aa12.02□□□□□ -0.48
HIPK3-202ENST00000379016 NPFFR1Q9GZQ6 430 aa12.02□□□□□ -0.48
HIPK3-202ENST00000379016 CHST8Q9H2A9 424 aa12.02□□□□□ -0.48
HIPK3-202ENST00000379016 KLF13Q9Y2Y9 288 aaPredicted RBP12.02□□□□□ -0.48
HIPK3-202ENST00000379016 MMP24Q9Y5R2 645 aa12.02□□□□□ -0.48
HIPK3-202ENST00000379016 IGSF5Q9NSI5 407 aa12.02□□□□□ -0.48
HIPK3-202ENST00000379016 SLC10A3P09131 477 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 CR2P20023 1033 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 MICBQ29980 383 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 RPS19BP1Q86WX3 136 aaKnown RBP12.02□□□□□ -0.49
HIPK3-202ENST00000379016 ADAT3Q96EY9 351 aaPredicted RBP12.02□□□□□ -0.49
HIPK3-202ENST00000379016 UBQLN3Q9H347 655 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 ST3GAL6Q9Y274 331 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 KCNMB2Q9Y691 235 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 CLDN18P56856 261 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 FOXK2Q01167 660 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 HIST3H3Q16695 136 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 PLK5Q496M5 336 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 DNLZQ5SXM8 178 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 TMEM81Q6P7N7 255 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 SLC25A26Q70HW3 274 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 ISCA2Q86U28 154 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 SNX22Q96L94 193 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 CSF3RQ99062 836 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 C3orf80F5H4A9 247 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 CD37P11049 281 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 OR2A2Q6IF42 318 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 BPIFA4PQ86YQ2 179 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 C10orf126Q8N4M7 172 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 L3HYPDHQ96EM0 354 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 PELI1Q96FA3 418 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 CDX4O14627 284 aaPredicted RBP12.02□□□□□ -0.49
HIPK3-202ENST00000379016 TIMP1P01033 207 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 ZNF735P0CB33 412 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 FGF8P55075 233 aaPredicted RBP12.02□□□□□ -0.49
HIPK3-202ENST00000379016 RING1Q06587 406 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 TMPRSS13Q9BYE2 586 aa12.02□□□□□ -0.49
HIPK3-202ENST00000379016 ZNF71Q9NQZ8 489 aaPredicted RBP12.02□□□□□ -0.49
HIPK3-202ENST00000379016 TRAV8-7A0A075B6U6 113 aa12.01□□□□□ -0.49
HIPK3-202ENST00000379016 RAB1BQ9H0U4 201 aa12.01□□□□□ -0.49
HIPK3-202ENST00000379016 CES1P1Q9UKY3 287 aa12.01□□□□□ -0.49
HIPK3-202ENST00000379016 BAK1Q16611 211 aa12.01□□□□□ -0.49
HIPK3-202ENST00000379016 SLC25A30Q5SVS4 291 aa12.01□□□□□ -0.49
HIPK3-202ENST00000379016 OR4S1Q8NGB4 309 aa12.01□□□□□ -0.49
HIPK3-202ENST00000379016 SLAMF6Q96DU3 332 aa12.01□□□□□ -0.49
HIPK3-202ENST00000379016 A0A1W2PN81 502 aa12.01□□□□□ -0.49
HIPK3-202ENST00000379016 MFSD2BA6NFX1 497 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms