RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 IGKV1D-8A0A087WSZ0 117 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 A0A0J9YW62 118 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 OR5H14A6NHG9 310 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 FGF16O43320 207 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 BCL2L11O43521 198 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 SS18L1O75177 396 aaPredicted RBP8.39□□□□□ -1.07
TRIM39-202ENST00000376659 RP2O75695 350 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 EIF1AXP47813 144 aaKnown RBP8.39□□□□□ -1.07
TRIM39-202ENST00000376659 PRAMEF20Q5VT98 475 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 ZNF584Q8IVC4 421 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 STPG2Q8N412 459 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 RRNAD1Q96FB5 475 aaKnown RBP8.39□□□□□ -1.07
TRIM39-202ENST00000376659 CLEC4MQ9H2X3 399 aaPredicted RBP8.39□□□□□ -1.07
TRIM39-202ENST00000376659 UPB1Q9UBR1 384 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 GPR160Q9UJ42 338 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 MRPS28Q9Y2Q9 187 aaKnown RBP8.39□□□□□ -1.07
TRIM39-202ENST00000376659 MYO7BQ6PIF6 2116 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 OR5H15A6NDH6 313 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 PATE3B3GLJ2 98 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 RRP8O43159 456 aaKnown RBP8.38□□□□□ -1.07
TRIM39-202ENST00000376659 STK17BO94768 372 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 GLAP06280 429 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 SELLP14151 372 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 ACKR3P25106 362 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 THBS4P35443 961 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 EXT1Q16394 746 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 RSPO4Q2I0M5 234 aaPredicted RBP8.38□□□□□ -1.07
TRIM39-202ENST00000376659 ALKAL2Q6UX46 152 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 UBALD2Q8IYN6 164 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 CCDC107Q8WV48 283 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 NAT6Q93015 286 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 C10orf35Q96D05 121 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 BCL2L14Q9BZR8 327 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 CENPMQ9NSP4 180 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 RYDENQ9NUL5 291 aaKnown RBP8.38□□□□□ -1.07
TRIM39-202ENST00000376659 DHRS7CA6NNS2 312 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 DHRS3O75911 302 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 HLA-AP01891 365 aaKnown RBP8.38□□□□□ -1.07
TRIM39-202ENST00000376659 MSR1P21757 451 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 GFRA1P56159 465 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 TMEM176BQ3YBM2 270 aaPredicted RBP8.38□□□□□ -1.07
TRIM39-202ENST00000376659 CHMP1BQ7LBR1 199 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 ARHGAP5-AS1Q96IT6 56 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 CDX2Q99626 313 aaPredicted RBP8.38□□□□□ -1.07
TRIM39-202ENST00000376659 NMES1Q9C002 83 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 PRDM6Q9NQX0 595 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 IGHV3-15A0A0B4J1V0 119 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 A0A0B4J2A0 478 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 UBE2QL1A1L167 161 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 ZNF726A6NNF4 738 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 CCSO14618 274 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 DNPH1O43598 174 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 RLN1P04808 185 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 CHRM2P08172 466 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 CLDN17P56750 224 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 ECH1Q13011 328 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 CARD17Q5XLA6 110 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 AWAT2Q6E213 333 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 Q96M66 194 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 GNRHR2Q96P88 292 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 DEPPQ9NTK1 212 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 SHPKQ9UHJ6 478 aa8.38□□□□□ -1.07
TRIM39-202ENST00000376659 MCTS1Q9ULC4 181 aaKnown RBP8.38□□□□□ -1.07
TRIM39-202ENST00000376659 PINLYPA6NC86 204 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 MPTX1A8MV57 137 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 SFTPDP35247 375 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 SLC6A9P48067 706 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 SSTP61278 116 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 FOXO1Q12778 655 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 TUSC1Q2TAM9 212 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 ANKRD55Q3KP44 614 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 C10orf91Q5T1B1 145 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 FAM27BQ5VT28 67 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 ABHD12BQ7Z5M8 362 aaPredicted RBP8.37□□□□□ -1.07
TRIM39-202ENST00000376659 CD163Q86VB7 1156 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 PSMF1Q92530 271 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 PECRQ9BY49 303 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 SLC25A32Q9H2D1 315 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 MRPS18CQ9Y3D5 142 aaKnown RBP8.37□□□□□ -1.07
TRIM39-202ENST00000376659 URB1O60287 2271 aaKnown RBP8.37□□□□□ -1.07
TRIM39-202ENST00000376659 DISC1C4P0D8 188 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 OR2F2O95006 317 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 PMP2P02689 132 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 ERCC1P07992 297 aaPredicted RBP8.37□□□□□ -1.07
TRIM39-202ENST00000376659 UBBP0CG47 229 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 ACP1P24666 158 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 UBA52P62987 128 aaKnown RBP8.37□□□□□ -1.07
TRIM39-202ENST00000376659 MRPS34P82930 218 aaKnown RBP8.37□□□□□ -1.07
TRIM39-202ENST00000376659 SPEM2Q0P670 501 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 OR2F1Q13607 317 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 KISS1Q15726 138 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 SLC23A3Q6PIS1 610 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 FAM57BQ71RH2 274 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 GPR137CQ8N3F9 429 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 PPP1R1CQ8WVI7 109 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 HAS2Q92819 552 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 PHYHIPLQ96FC7 376 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 GAL3ST1Q99999 423 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 PPA2Q9H2U2 334 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 F8W036 122 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms