RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 TCEAL7Q9BRU2 100 aa18.66■□□□□ 0.58
UPF3A-202ENST00000375299 EMC6Q9BV81 110 aa18.66■□□□□ 0.58
UPF3A-202ENST00000375299 METTL1Q9UBP6 276 aaKnown RBP18.66■□□□□ 0.58
UPF3A-202ENST00000375299 RPH3AQ9Y2J0 694 aaPredicted RBP18.66■□□□□ 0.58
UPF3A-202ENST00000375299 FAM3AP98173 230 aa18.66■□□□□ 0.58
UPF3A-202ENST00000375299 SURF2Q15527 256 aaPredicted RBP18.66■□□□□ 0.58
UPF3A-202ENST00000375299 TMPRSS9Q7Z410 1059 aa18.66■□□□□ 0.58
UPF3A-202ENST00000375299 ZNF441Q8N8Z8 693 aa18.66■□□□□ 0.58
UPF3A-202ENST00000375299 GPER1Q99527 375 aa18.66■□□□□ 0.58
UPF3A-202ENST00000375299 OR10A2Q9H208 303 aa18.66■□□□□ 0.58
UPF3A-202ENST00000375299 TUBA4BQ9H853 241 aa18.66■□□□□ 0.58
UPF3A-202ENST00000375299 KLHL13Q9P2N7 655 aa18.66■□□□□ 0.58
UPF3A-202ENST00000375299 C14orf166Q9Y224 244 aaKnown RBP18.66■□□□□ 0.58
UPF3A-202ENST00000375299 STARD10Q9Y365 291 aa18.66■□□□□ 0.58
UPF3A-202ENST00000375299 ZNF878C9JN71 531 aa18.65■□□□□ 0.58
UPF3A-202ENST00000375299 IFNA2P01563 188 aa18.65■□□□□ 0.58
UPF3A-202ENST00000375299 SNRNP70P08621 437 aaKnown RBP18.65■□□□□ 0.58
UPF3A-202ENST00000375299 LAP3P28838 519 aa18.65■□□□□ 0.58
UPF3A-202ENST00000375299 FABP9Q0Z7S8 132 aa18.65■□□□□ 0.58
UPF3A-202ENST00000375299 OR9K2Q8NGE7 335 aa18.65■□□□□ 0.58
UPF3A-202ENST00000375299 OR8B12Q8NGG6 310 aa18.65■□□□□ 0.58
UPF3A-202ENST00000375299 OR1N1Q8NGS0 311 aa18.65■□□□□ 0.58
UPF3A-202ENST00000375299 GPR84Q9NQS5 396 aa18.65■□□□□ 0.58
UPF3A-202ENST00000375299 GPR27Q9NS67 375 aa18.65■□□□□ 0.58
UPF3A-202ENST00000375299 DEDDO75618 318 aa18.64■□□□□ 0.58
UPF3A-202ENST00000375299 KNG1P01042 644 aa18.64■□□□□ 0.58
UPF3A-202ENST00000375299 RBMXP38159 391 aaKnown RBP18.64■□□□□ 0.58
UPF3A-202ENST00000375299 FASLGP48023 281 aa18.64■□□□□ 0.58
UPF3A-202ENST00000375299 BLKP51451 505 aa18.64■□□□□ 0.58
UPF3A-202ENST00000375299 MAFIPQ8WZ33 124 aa18.64■□□□□ 0.58
UPF3A-202ENST00000375299 TAAR9Q96RI9 348 aa18.64■□□□□ 0.58
UPF3A-202ENST00000375299 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.64■□□□□ 0.58
UPF3A-202ENST00000375299 MMP17Q9ULZ9 603 aa18.64■□□□□ 0.58
UPF3A-202ENST00000375299 LHFPL6Q9Y693 200 aa18.64■□□□□ 0.58
UPF3A-202ENST00000375299 RP1P56715 2156 aa18.64■□□□□ 0.57
UPF3A-202ENST00000375299 C7orf77A4D0Y5 90 aa18.64■□□□□ 0.57
UPF3A-202ENST00000375299 TLCD2A6NGC4 264 aa18.64■□□□□ 0.57
UPF3A-202ENST00000375299 TSPAN15O95858 294 aa18.64■□□□□ 0.57
UPF3A-202ENST00000375299 SLC2A1P11166 492 aa18.64■□□□□ 0.57
UPF3A-202ENST00000375299 ZNF14P17017 642 aaPredicted RBP18.64■□□□□ 0.57
UPF3A-202ENST00000375299 THBS4P35443 961 aa18.64■□□□□ 0.57
UPF3A-202ENST00000375299 PMELP40967 661 aa18.64■□□□□ 0.57
UPF3A-202ENST00000375299 TMEM33P57088 247 aa18.64■□□□□ 0.57
UPF3A-202ENST00000375299 ST8SIA1Q92185 356 aa18.64■□□□□ 0.57
UPF3A-202ENST00000375299 FBXO17Q96EF6 278 aa18.64■□□□□ 0.57
UPF3A-202ENST00000375299 FAM71F1Q96KD3 344 aaPredicted RBP18.64■□□□□ 0.57
UPF3A-202ENST00000375299 PRRX2Q99811 253 aa18.64■□□□□ 0.57
UPF3A-202ENST00000375299 SMIM3Q9BZL3 60 aa18.64■□□□□ 0.57
UPF3A-202ENST00000375299 RGCCQ9H4X1 137 aa18.64■□□□□ 0.57
UPF3A-202ENST00000375299 AMDHD2Q9Y303 409 aa18.64■□□□□ 0.57
UPF3A-202ENST00000375299 TRAV20A0A0B4J274 112 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 ANKUB1A6NFN9 424 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 A6NLC8 198 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 EIF1BO60739 113 aaKnown RBP18.63■□□□□ 0.57
UPF3A-202ENST00000375299 GIMD1P0DJR0 217 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 NAT2P11245 290 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 SNCAP37840 140 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 EIF1P41567 113 aaKnown RBP18.63■□□□□ 0.57
UPF3A-202ENST00000375299 ZNF84P51523 738 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 NSDHLQ15738 373 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 KIAA0895LQ68EN5 471 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 FAM89BQ8N5H3 189 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 OR51T1Q8NGJ9 327 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 FNDC9Q8TBE3 224 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 CD207Q9UJ71 328 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 TUBD1Q9UJT1 453 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 POLR1DQ9Y2S0 133 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 GLP1RP43220 463 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 TGIF1Q15583 401 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 GKN2Q86XP6 184 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 COMMD1Q8N668 190 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 UBAC2Q8NBM4 344 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 OR51M1Q9H341 326 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 PISDQ9UG56 409 aa18.63■□□□□ 0.57
UPF3A-202ENST00000375299 A0A1W2PPH5 198 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 LILRA5A6NI73 299 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 ZNF17P17021 662 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 ACKR3P25106 362 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 CCR5P51681 352 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 ZNF121P58317 390 aaPredicted RBP18.62■□□□□ 0.57
UPF3A-202ENST00000375299 MIDNQ504T8 468 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 IGSF11Q5DX21 431 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 KRBOX4Q5JUW0 171 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 PNLDC1Q8NA58 520 aaKnown RBP18.62■□□□□ 0.57
UPF3A-202ENST00000375299 OR2AJ1Q8NGZ0 328 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 SSC4DQ8WTU2 575 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 ISOC2Q96AB3 205 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 IP6K3Q96PC2 410 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 NUDT22Q9BRQ3 303 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 FAM212BQ9NTI7 297 aaPredicted RBP18.62■□□□□ 0.57
UPF3A-202ENST00000375299 ZNF319Q9P2F9 582 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 SLCO1B1Q9Y6L6 691 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 KNL1Q8NG31 2342 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 C2orf72A6NCS6 295 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 FOXI3A8MTJ6 420 aaPredicted RBP18.62■□□□□ 0.57
UPF3A-202ENST00000375299 IGHV2-5P01817 119 aa18.62■□□□□ 0.57
UPF3A-202ENST00000375299 APOBEC1P41238 236 aaKnown RBP18.62■□□□□ 0.57
UPF3A-202ENST00000375299 CSNK1EP49674 416 aaKnown RBP18.62■□□□□ 0.57
UPF3A-202ENST00000375299 GUK1Q16774 197 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms