RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 CDC20BQ86Y33 519 aa17.45■□□□□ 0.38
TGFBR1-201ENST00000374990 D2HGDHQ8N465 521 aa17.45■□□□□ 0.38
TGFBR1-201ENST00000374990 MCHR2Q969V1 340 aa17.45■□□□□ 0.38
TGFBR1-201ENST00000374990 AP1S3Q96PC3 154 aa17.45■□□□□ 0.38
TGFBR1-201ENST00000374990 DEFB127Q9H1M4 99 aa17.45■□□□□ 0.38
TGFBR1-201ENST00000374990 AK3Q9UIJ7 227 aa17.45■□□□□ 0.38
TGFBR1-201ENST00000374990 RGS13O14921 159 aa17.45■□□□□ 0.38
TGFBR1-201ENST00000374990 SCAF4O95104 1147 aaKnown RBP17.45■□□□□ 0.38
TGFBR1-201ENST00000374990 FBXW5Q969U6 566 aa17.45■□□□□ 0.38
TGFBR1-201ENST00000374990 GNRHR2Q96P88 292 aa17.45■□□□□ 0.38
TGFBR1-201ENST00000374990 TDRD15B5MCY1 1934 aaKnown RBP17.45■□□□□ 0.38
TGFBR1-201ENST00000374990 SHISA8B8ZZ34 492 aa17.45■□□□□ 0.38
TGFBR1-201ENST00000374990 TERTO14746 1132 aaKnown RBP17.45■□□□□ 0.38
TGFBR1-201ENST00000374990 DUSP2Q05923 314 aa17.45■□□□□ 0.38
TGFBR1-201ENST00000374990 SCN3AQ9NY46 2000 aa17.45■□□□□ 0.38
TGFBR1-201ENST00000374990 ANGPTL7O43827 346 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 PEBP1P30086 187 aaKnown RBP17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 MESTQ5EB52 335 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 PXDC1Q5TGL8 231 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 C14orf79Q96F83 325 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 GFOD1Q9NXC2 390 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 CCDC187A0A096LP49 1063 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 HYAL3O43820 417 aaPredicted RBP17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 CRYAAP02489 173 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 GSK3AP49840 483 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 SH3BGRL2Q9UJC5 107 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 NKX6-3A6NJ46 265 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 INSM1Q01101 510 aaPredicted RBP17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 SKP2Q13309 424 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 COL13A1Q5TAT6 717 aaPredicted RBP17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 FAHD2BQ6P2I3 314 aaPredicted RBP17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 UQCC3Q6UW78 93 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 NAA40Q86UY6 237 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 FAHD2AQ96GK7 314 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 CACFD1Q9UGQ2 172 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 ZNF107Q9UII5 783 aaPredicted RBP17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 SIPA1L1O43166 1804 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 ACSM4P0C7M7 580 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 RPA2P15927 270 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 MESP2Q0VG99 397 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 TESK1Q15569 626 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 TMEM182Q6ZP80 229 aaPredicted RBP17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 ZFP82Q8N141 532 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 ZFP92A6NM28 416 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 DUS4LO95620 317 aaKnown RBP17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 IFITM3Q01628 133 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 CATSPERDQ86XM0 798 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 C10orf90Q96M02 699 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 EGLN1Q9GZT9 426 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 DSPPQ9NZW4 1301 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 PTPRFP10586 1907 aa17.44■□□□□ 0.38
TGFBR1-201ENST00000374990 PTP4A3O75365 173 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 S100A7P31151 101 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 PRAMEF5Q5TYX0 476 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 PRAMEF6Q5VXH4 476 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 BATF2Q8N1L9 274 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 SLC35G3Q8N808 338 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 ARHGAP5-AS1Q96IT6 56 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 PPP1R3EQ9H7J1 279 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 P4HTMQ9NXG6 502 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 TIMM8BQ9Y5J9 83 aaPredicted RBP17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 F6UZH7 168 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 PPP1R2P9O14990 202 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 CD1AP06126 327 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 LIMS1P48059 325 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 ZNF718Q3SXZ3 478 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 WDR74Q6RFH5 385 aaPredicted RBP17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 C17orf107Q6ZR85 190 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 SLC38A6Q8IZM9 456 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 COMMD1Q8N668 190 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 HGDQ93099 445 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 TM4SF19Q96DZ7 209 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 CIB3Q96Q77 187 aaPredicted RBP17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 PARP12Q9H0J9 701 aaKnown RBP17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 ZFP64Q9NPA5 681 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 LSM2Q9Y333 95 aaKnown RBP17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 MTCH2Q9Y6C9 303 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 PARP14Q460N5 1801 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 IGKV1-8A0A0C4DH67 115 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 hCG_1809904A0A1W2PP81 198 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 A0A1W2PPE2 198 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 A0A1W2PR64 198 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 A0A1W2PRV1 198 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 TCRBV16S1A1N1A0A5B0 115 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 TRIM64BA6NI03 449 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 C1QCP02747 245 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 OR13C7P0DN81 318 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 SRD5A2P31213 254 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 FAM74A1Q5RGS3 127 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 PRRX2Q99811 253 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 FRRS1LQ9P0K9 344 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 FBXO4Q9UKT5 387 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 MDFIC2A0A1B0GVS7 189 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 NME2P1O60361 137 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 IL2RAP01589 272 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 TSEN54Q7Z6J9 526 aaKnown RBP17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 EDARADDQ8WWZ3 215 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 SAMD10Q9BYL1 202 aa17.43■□□□□ 0.38
TGFBR1-201ENST00000374990 GPR31O00270 319 aa17.42■□□□□ 0.38
TGFBR1-201ENST00000374990 GPANK1O95872 356 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms