RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 PYCARD-AS1I3L0S3 204 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 CST4P01036 141 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 GRPP07492 148 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 RPA2P15927 270 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 SUMO3P55854 103 aaPredicted RBP12.79□□□□□ -0.36
LMX1B-202ENST00000373474 BTNL3Q6UXE8 466 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 OTOSQ8NHW6 89 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 SLC17A5Q9NRA2 495 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 SLC23A1Q9UHI7 598 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 ING1Q9UK53 422 aaPredicted RBP12.79□□□□□ -0.36
LMX1B-202ENST00000373474 TBX21Q9UL17 535 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 GATCO43716 136 aaKnown RBP12.79□□□□□ -0.36
LMX1B-202ENST00000373474 OR7C2O60412 319 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 TCN2P20062 427 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 GUCA2AQ02747 115 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 LHX8Q68G74 356 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 YRDCQ86U90 279 aaKnown RBP12.79□□□□□ -0.36
LMX1B-202ENST00000373474 TP53I13Q8NBR0 393 aaPredicted RBP12.79□□□□□ -0.36
LMX1B-202ENST00000373474 IFI44Q8TCB0 444 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 HGDQ93099 445 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 SPACA5Q96QH8 159 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 TRIB1Q96RU8 372 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 ZNF17P17021 662 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 ERVFC1-1P60608 527 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 C6orf15Q6UXA7 325 aaPredicted RBP12.79□□□□□ -0.36
LMX1B-202ENST00000373474 BATF2Q8N1L9 274 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 ESRP2Q9H6T0 727 aaKnown RBP12.79□□□□□ -0.36
LMX1B-202ENST00000373474 KIAA1324LA8MWY0 1029 aaPredicted RBP12.79□□□□□ -0.36
LMX1B-202ENST00000373474 XRCC2O43543 280 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 PRKNO60260 465 aaPredicted RBP12.79□□□□□ -0.36
LMX1B-202ENST00000373474 TTRP02766 147 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 ARR3P36575 388 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 UBE3DQ7Z6J8 389 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 TSEN54Q7Z6J9 526 aaKnown RBP12.79□□□□□ -0.36
LMX1B-202ENST00000373474 NOXO1Q8NFA2 376 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 DYRK2Q92630 601 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 THOC3Q96J01 351 aaKnown RBP12.79□□□□□ -0.36
LMX1B-202ENST00000373474 RNF24Q9Y225 148 aa12.79□□□□□ -0.36
LMX1B-202ENST00000373474 GPM6AP51674 278 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 TRIM61Q5EBN2 209 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 ELFN2Q5R3F8 820 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 KIAA1958Q8N8K9 716 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 NTNG2Q96CW9 530 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 ALG14Q96F25 216 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 BARX1Q9HBU1 254 aaPredicted RBP12.78□□□□□ -0.36
LMX1B-202ENST00000373474 SH3BGRL2Q9UJC5 107 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 MRPS2Q9Y399 296 aaKnown RBP12.78□□□□□ -0.36
LMX1B-202ENST00000373474 GOLGA4Q13439 2230 aaKnown RBP12.78□□□□□ -0.36
LMX1B-202ENST00000373474 OR2M5A3KFT3 312 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 ZNF121P58317 390 aaPredicted RBP12.78□□□□□ -0.36
LMX1B-202ENST00000373474 SHBQ15464 509 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 OR8B8Q15620 311 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 WDR73Q6P4I2 378 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 ARHGEF39Q8N4T4 335 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 OR8D4Q8NGM9 314 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 OR8B4Q96RC9 309 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 TAAR6Q96RI8 345 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 A0A1B0GTQ1 180 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 METAP1P53582 386 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 TIAL1Q01085 375 aaKnown RBP eCLIP12.78□□□□□ -0.36
LMX1B-202ENST00000373474 FXNQ16595 210 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 DRAM2Q6UX65 266 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 KMT5CQ86Y97 462 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 ADGRL4Q9HBW9 690 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 LRP12Q9Y561 859 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 NDUFB6O95139 128 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 IGHV3-9P01782 118 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 ATF1P18846 271 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 RAG2P55895 527 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 NHLH1Q02575 133 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 NHLH2Q02577 135 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 PMS2P11Q13670 270 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 PTCRAQ6ISU1 281 aaPredicted RBP12.78□□□□□ -0.36
LMX1B-202ENST00000373474 BHLHE23Q8NDY6 225 aa12.78□□□□□ -0.36
LMX1B-202ENST00000373474 WDR61Q9GZS3 305 aaKnown RBP12.78□□□□□ -0.36
LMX1B-202ENST00000373474 A0A1W2PPC4 97 aa12.77□□□□□ -0.36
LMX1B-202ENST00000373474 NCBP2LA6PVI3 153 aaKnown RBP12.77□□□□□ -0.36
LMX1B-202ENST00000373474 NRG2O14511 850 aaPredicted RBP12.77□□□□□ -0.36
LMX1B-202ENST00000373474 ABCD4O14678 606 aa12.77□□□□□ -0.36
LMX1B-202ENST00000373474 WNT1P04628 370 aa12.77□□□□□ -0.36
LMX1B-202ENST00000373474 TMEM196Q5HYL7 178 aa12.77□□□□□ -0.36
LMX1B-202ENST00000373474 LSRQ86X29 649 aaPredicted RBP12.77□□□□□ -0.36
LMX1B-202ENST00000373474 KTI12Q96EK9 354 aaPredicted RBP12.77□□□□□ -0.36
LMX1B-202ENST00000373474 MRGPRX3Q96LB0 322 aa12.77□□□□□ -0.36
LMX1B-202ENST00000373474 MEIKINA0A087WXM9 373 aa12.77□□□□□ -0.36
LMX1B-202ENST00000373474 BMPR1BO00238 502 aa12.77□□□□□ -0.36
LMX1B-202ENST00000373474 NKX2-2O95096 273 aa12.77□□□□□ -0.36
LMX1B-202ENST00000373474 RPL24P83731 157 aaKnown RBP12.77□□□□□ -0.36
LMX1B-202ENST00000373474 OR8G1Q15617 311 aa12.77□□□□□ -0.36
LMX1B-202ENST00000373474 HSD17B13Q7Z5P4 300 aaPredicted RBP12.77□□□□□ -0.36
LMX1B-202ENST00000373474 EID2BQ96D98 161 aa12.77□□□□□ -0.36
LMX1B-202ENST00000373474 FAM210BQ96KR6 192 aa12.77□□□□□ -0.36
LMX1B-202ENST00000373474 RCL1Q9Y2P8 373 aaKnown RBP12.77□□□□□ -0.36
LMX1B-202ENST00000373474 OR5I1Q13606 314 aa12.77□□□□□ -0.37
LMX1B-202ENST00000373474 C21orf62-AS1Q17RA5 79 aa12.77□□□□□ -0.37
LMX1B-202ENST00000373474 TMEM37Q8WXS4 190 aa12.77□□□□□ -0.37
LMX1B-202ENST00000373474 EDEM2Q9BV94 578 aa12.77□□□□□ -0.37
LMX1B-202ENST00000373474 SLC35B3Q9H1N7 401 aa12.77□□□□□ -0.37
LMX1B-202ENST00000373474 OR5V1Q9UGF6 321 aa12.77□□□□□ -0.37
LMX1B-202ENST00000373474 TOX3O15405 576 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms