RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 A6NJ64 397 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 NDUFB2O95178 105 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 STATHP02808 62 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 RPS4Y1P22090 263 aaKnown RBP8.48□□□□□ -1.05
SF3A3-201ENST00000373019 PSMB5P28074 263 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 CDKN2AP42771 156 aaKnown RBP8.48□□□□□ -1.05
SF3A3-201ENST00000373019 MMP16P51512 607 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 DCAF7P61962 342 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 ARHGAP11BQ3KRB8 267 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 TMEM225Q6GV28 225 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 SLC16A9Q7RTY1 509 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 ADGRE4PQ86SQ3 457 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 CDC20BQ86Y33 519 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 LFNGQ8NES3 379 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 CYYR1Q96J86 154 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 C5orf34Q96MH7 638 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 ZNF681Q96N22 645 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 PRRX2Q99811 253 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 GSX1Q9H4S2 264 aaPredicted RBP8.48□□□□□ -1.05
SF3A3-201ENST00000373019 SERINC1Q9NRX5 453 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 DKKL1Q9UK85 242 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 RHBDD3Q9Y3P4 386 aa8.48□□□□□ -1.05
SF3A3-201ENST00000373019 KIAA1549LQ6ZVL6 1849 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 A6NIZ1 184 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 H7C4K7 107 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 SCGNO76038 276 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 HPRT1P00492 218 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 CHRM2P08172 466 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 SLC11A1P49279 550 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 TNFSF10P50591 281 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 RAP1BP61224 184 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 SGCGQ13326 291 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 CTXN3Q4LDR2 81 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 EIPR1Q53HC9 387 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 MFSD12Q6NUT3 480 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 LRP11Q86VZ4 500 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 OR2I1PQ8NGU4 316 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 IFI44Q8TCB0 444 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 TSEN15Q8WW01 171 aaKnown RBP8.47□□□□□ -1.05
SF3A3-201ENST00000373019 C4orf45Q96LM5 186 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 CMKLR1Q99788 373 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 ABHD14AQ9BUJ0 271 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 MSL2Q9HCI7 577 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 HSF4Q9ULV5 492 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 STRAPQ9Y3F4 350 aaKnown RBP8.47□□□□□ -1.05
SF3A3-201ENST00000373019 FANCMQ8IYD8 2048 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 XKRY2A2RUG3 117 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 ZNF860A6NHJ4 632 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 K7EP13 123 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 XKRYO14609 159 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 SSR2P43308 183 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 P2RY1P47900 373 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 ICAM4Q14773 271 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 ZNF880Q6PDB4 577 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 C12orf76Q8N812 135 aaPredicted RBP8.47□□□□□ -1.05
SF3A3-201ENST00000373019 EXTL1Q92935 676 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 AMELYQ99218 206 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 OR2J1Q9GZK6 312 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 GLRX2Q9NS18 164 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 TMEM242Q9NWH2 141 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 AURKAIP1Q9NWT8 199 aaPredicted RBP8.47□□□□□ -1.05
SF3A3-201ENST00000373019 DCDC2BA2VCK2 349 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 NKX6-3A6NJ46 265 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 NID1P14543 1247 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 RAC2P15153 192 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 TFF2Q03403 129 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 ZFP36L1Q07352 338 aaKnown RBP8.47□□□□□ -1.05
SF3A3-201ENST00000373019 CEBPEQ15744 281 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 RIPPLY2Q5TAB7 128 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 NUFIP2Q7Z417 695 aaKnown RBP8.47□□□□□ -1.05
SF3A3-201ENST00000373019 C11orf42Q8N5U0 333 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 FAM213BQ8TBF2 198 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 NKD1Q969G9 470 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 IGSF21Q96ID5 467 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 NIPSNAP3BQ9BS92 247 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 IKZF2Q9UKS7 526 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 LIPGQ9Y5X9 500 aa8.47□□□□□ -1.05
SF3A3-201ENST00000373019 TSPAN2O60636 221 aa8.46□□□□□ -1.05
SF3A3-201ENST00000373019 LCATP04180 440 aa8.46□□□□□ -1.05
SF3A3-201ENST00000373019 IFNA6P05013 189 aa8.46□□□□□ -1.05
SF3A3-201ENST00000373019 IGFBP3P17936 291 aaPredicted RBP8.46□□□□□ -1.05
SF3A3-201ENST00000373019 PMS2P11Q13670 270 aa8.46□□□□□ -1.05
SF3A3-201ENST00000373019 NFATC4Q14934 902 aa8.46□□□□□ -1.05
SF3A3-201ENST00000373019 TMEM176BQ3YBM2 270 aaPredicted RBP8.46□□□□□ -1.05
SF3A3-201ENST00000373019 SLC48A1Q6P1K1 146 aa8.46□□□□□ -1.05
SF3A3-201ENST00000373019 LYPD6Q86Y78 171 aa8.46□□□□□ -1.05
SF3A3-201ENST00000373019 KXD1Q9BQD3 176 aa8.46□□□□□ -1.05
SF3A3-201ENST00000373019 AIF1LQ9BQI0 150 aa8.46□□□□□ -1.05
SF3A3-201ENST00000373019 PCED1AQ9H1Q7 454 aa8.46□□□□□ -1.05
SF3A3-201ENST00000373019 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.46□□□□□ -1.05
SF3A3-201ENST00000373019 FOXJ2Q9P0K8 574 aa8.46□□□□□ -1.05
SF3A3-201ENST00000373019 OSGIN2Q9Y236 505 aa8.46□□□□□ -1.05
SF3A3-201ENST00000373019 MRPS23Q9Y3D9 190 aaKnown RBP8.46□□□□□ -1.05
SF3A3-201ENST00000373019 PLRG1O43660 514 aaKnown RBP8.46□□□□□ -1.06
SF3A3-201ENST00000373019 CSNK2A2P19784 350 aaPredicted RBP8.46□□□□□ -1.06
SF3A3-201ENST00000373019 CARD18P57730 90 aa8.46□□□□□ -1.06
SF3A3-201ENST00000373019 SELENOTP62341 195 aa8.46□□□□□ -1.06
SF3A3-201ENST00000373019 TDRG1Q3Y452 100 aa8.46□□□□□ -1.06
SF3A3-201ENST00000373019 LEMD1Q68G75 181 aa8.46□□□□□ -1.06
SF3A3-201ENST00000373019 PTCRAQ6ISU1 281 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms