RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 DHPSP49366 369 aaPredicted RBP4.79□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF84P51523 738 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 P2RY4P51582 365 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 EMP2P54851 167 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 RRADP55042 308 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 TMEM50BP56557 158 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 PRPS1P60891 318 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 SPCS3P61009 180 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 DEFA6Q01524 100 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 NHLH2Q02577 135 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 RASGEF1BQ0VAM2 473 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 BIKQ13323 160 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 ZNHIT3Q15649 155 aaPredicted RBP4.79□□□□□ -1.64
ATG4A-204ENST00000372246 TANGO2Q6ICL3 276 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 CLEC2AQ6UVW9 174 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 HIST2H3AQ71DI3 136 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 P4HA3Q7Z4N8 544 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 C20orf196Q8IYI0 205 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 TMEM156Q8N614 296 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 OR51E1Q8TCB6 317 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 THAP3Q8WTV1 239 aaPredicted RBP4.79□□□□□ -1.64
ATG4A-204ENST00000372246 LIN37Q96GY3 246 aaPredicted RBP4.79□□□□□ -1.64
ATG4A-204ENST00000372246 FAM71F1Q96KD3 344 aaPredicted RBP4.79□□□□□ -1.64
ATG4A-204ENST00000372246 WFIKKN1Q96NZ8 548 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 GNRHR2Q96P88 292 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 CCDC3Q9BQI4 270 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 PLA2G2FQ9BZM2 168 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 TOLLIPQ9H0E2 274 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 KIR3DX1Q9H7L2 352 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 TUBA4BQ9H853 241 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 RNF122Q9H9V4 155 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 G6PC2Q9NQR9 355 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 VSX1Q9NZR4 365 aaPredicted RBP4.79□□□□□ -1.64
ATG4A-204ENST00000372246 PADI1Q9ULC6 663 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 TIMM10BQ9Y5J6 103 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 FLVCR1Q9Y5Y0 555 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 FAM221BA6H8Z2 402 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 ADARB2-AS1A8MUL3 147 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 FKTNO75072 461 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 CRTAPO75718 401 aaPredicted RBP4.79□□□□□ -1.64
ATG4A-204ENST00000372246 NSA2O95478 260 aaKnown RBP4.79□□□□□ -1.64
ATG4A-204ENST00000372246 TSPAN15O95858 294 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 CXCL10P02778 98 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 IGFBP3P17936 291 aaPredicted RBP4.79□□□□□ -1.64
ATG4A-204ENST00000372246 RPL12P30050 165 aaKnown RBP4.79□□□□□ -1.64
ATG4A-204ENST00000372246 PTGER4P35408 488 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 EFNA3P52797 238 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 ERVFRD-1P60508 538 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 RPS23P62266 143 aaKnown RBP4.79□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF117Q03924 483 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 SRSF4Q08170 494 aaKnown RBP4.79□□□□□ -1.64
ATG4A-204ENST00000372246 GUK1Q16774 197 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 IAH1Q2TAA2 248 aaPredicted RBP4.79□□□□□ -1.64
ATG4A-204ENST00000372246 THEM4Q5T1C6 240 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 PLXDC2Q6UX71 529 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 TMEM182Q6ZP80 229 aaPredicted RBP4.79□□□□□ -1.64
ATG4A-204ENST00000372246 C1orf122Q6ZSJ8 110 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 HOGA1Q86XE5 327 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 CATSPERDQ86XM0 798 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 PRR18Q8N4B5 295 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF561Q8N587 486 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 C15orf54Q8N8G6 183 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 SUMF1Q8NBK3 374 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 UBAC2Q8NBM4 344 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 SPPL3Q8TCT6 385 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 MISP3Q96FF7 219 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 PRRT1Q99946 306 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 SCRT1Q9BWW7 348 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 TPSD1Q9BZJ3 242 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 OR10A5Q9H207 317 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 LIME1Q9H400 295 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 PRDM13Q9H4Q3 707 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 DOK5Q9P104 306 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 METTL1Q9UBP6 276 aaKnown RBP4.79□□□□□ -1.64
ATG4A-204ENST00000372246 OR52A1Q9UKL2 312 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 RAB22AQ9UL26 194 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 CLDN16Q9Y5I7 305 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 ELOA3CA0A087WX78 387 aaPredicted RBP4.78□□□□□ -1.64
ATG4A-204ENST00000372246 IGLV1-36A0A0B4J1U3 117 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 A0A1W2PR80 420 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 PRSS37A4D1T9 235 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 LINC01553A4QN01 128 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 KAT7O95251 611 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 PRH1P02810 166 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 BGLAPP02818 100 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 MT-ND4LP03901 98 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 S100A8P05109 93 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 COX5BP10606 129 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 FABP4P15090 132 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 CXCR1P25024 350 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 G0S2P27469 103 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 RIDAP52758 137 aaKnown RBP4.78□□□□□ -1.64
ATG4A-204ENST00000372246 SLC25A1P53007 311 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 RAB4BP61018 213 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 LSM6P62312 80 aaKnown RBP4.78□□□□□ -1.64
ATG4A-204ENST00000372246 MFAP5Q13361 173 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 GPM6BQ13491 265 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF674Q2M3X9 581 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 NKAIN1Q4KMZ8 207 aa4.78□□□□□ -1.64
ATG4A-204ENST00000372246 AADACL3Q5VUY0 350 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms