RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 GGNBP1Q5YKI7 109 aa14.28□□□□□ -0.12
COL17A1-202ENST00000369733 MRGPRX4Q96LA9 322 aa14.28□□□□□ -0.12
COL17A1-202ENST00000369733 GHITMQ9H3K2 345 aa14.28□□□□□ -0.12
COL17A1-202ENST00000369733 ZNF98A6NK75 572 aa14.28□□□□□ -0.12
COL17A1-202ENST00000369733 GP1BAP07359 652 aa14.28□□□□□ -0.12
COL17A1-202ENST00000369733 CTRB1P17538 263 aa14.28□□□□□ -0.12
COL17A1-202ENST00000369733 SLC37A1P57057 533 aa14.28□□□□□ -0.12
COL17A1-202ENST00000369733 FOXF1Q12946 379 aa14.28□□□□□ -0.12
COL17A1-202ENST00000369733 SLC10A1Q14973 349 aa14.28□□□□□ -0.12
COL17A1-202ENST00000369733 NKAIN1Q4KMZ8 207 aa14.28□□□□□ -0.12
COL17A1-202ENST00000369733 CTRB2Q6GPI1 263 aa14.28□□□□□ -0.12
COL17A1-202ENST00000369733 FAHD2BQ6P2I3 314 aaPredicted RBP14.28□□□□□ -0.12
COL17A1-202ENST00000369733 NOXO1Q8NFA2 376 aa14.28□□□□□ -0.12
COL17A1-202ENST00000369733 NTNG2Q96CW9 530 aa14.28□□□□□ -0.12
COL17A1-202ENST00000369733 FAHD2AQ96GK7 314 aa14.28□□□□□ -0.12
COL17A1-202ENST00000369733 ZNF764Q96H86 408 aaPredicted RBP14.28□□□□□ -0.12
COL17A1-202ENST00000369733 FMODQ06828 376 aa14.27□□□□□ -0.12
COL17A1-202ENST00000369733 NCMAPQ5T1S8 102 aa14.27□□□□□ -0.12
COL17A1-202ENST00000369733 ZNF547Q8IVP9 402 aa14.27□□□□□ -0.12
COL17A1-202ENST00000369733 AGBL5Q8NDL9 886 aa14.27□□□□□ -0.12
COL17A1-202ENST00000369733 CNTD2Q9H8S5 307 aa14.27□□□□□ -0.12
COL17A1-202ENST00000369733 UCK1Q9HA47 277 aa14.27□□□□□ -0.12
COL17A1-202ENST00000369733 ADAP1O75689 374 aa14.27□□□□□ -0.12
COL17A1-202ENST00000369733 CAPZBP47756 277 aa14.27□□□□□ -0.12
COL17A1-202ENST00000369733 VEGFBP49765 207 aa14.27□□□□□ -0.12
COL17A1-202ENST00000369733 HTRA3P83110 453 aa14.27□□□□□ -0.12
COL17A1-202ENST00000369733 ETFDHQ16134 617 aa14.27□□□□□ -0.12
COL17A1-202ENST00000369733 PRAMEF5Q5TYX0 476 aa14.27□□□□□ -0.12
COL17A1-202ENST00000369733 PRAMEF6Q5VXH4 476 aa14.27□□□□□ -0.12
COL17A1-202ENST00000369733 LAIR2Q6ISS4 152 aa14.27□□□□□ -0.12
COL17A1-202ENST00000369733 SLC35D1Q9NTN3 355 aa14.27□□□□□ -0.12
COL17A1-202ENST00000369733 NHSL1Q5SYE7 1610 aa14.27□□□□□ -0.13
COL17A1-202ENST00000369733 LINC01553A4QN01 128 aa14.27□□□□□ -0.13
COL17A1-202ENST00000369733 ANGPTL7O43827 346 aa14.27□□□□□ -0.13
COL17A1-202ENST00000369733 CRYBA1P05813 215 aa14.27□□□□□ -0.13
COL17A1-202ENST00000369733 CXCL2P19875 107 aa14.27□□□□□ -0.13
COL17A1-202ENST00000369733 SUMO1P63165 101 aaKnown RBP14.27□□□□□ -0.13
COL17A1-202ENST00000369733 TCTN1Q2MV58 587 aa14.27□□□□□ -0.13
COL17A1-202ENST00000369733 ZNF66Q6ZN08 573 aa14.27□□□□□ -0.13
COL17A1-202ENST00000369733 NMES1Q9C002 83 aa14.27□□□□□ -0.13
COL17A1-202ENST00000369733 ZDHHC11Q9H8X9 412 aa14.27□□□□□ -0.13
COL17A1-202ENST00000369733 FRRS1LQ9P0K9 344 aa14.27□□□□□ -0.13
COL17A1-202ENST00000369733 CACNA1CQ13936 2221 aa14.27□□□□□ -0.13
COL17A1-202ENST00000369733 CRHP06850 196 aa14.27□□□□□ -0.13
COL17A1-202ENST00000369733 PMP22Q01453 160 aa14.27□□□□□ -0.13
COL17A1-202ENST00000369733 ZNF117Q03924 483 aa14.27□□□□□ -0.13
COL17A1-202ENST00000369733 SLC25A26Q70HW3 274 aa14.27□□□□□ -0.13
COL17A1-202ENST00000369733 ISOC2Q96AB3 205 aa14.27□□□□□ -0.13
COL17A1-202ENST00000369733 CLN5O75503 358 aa14.26□□□□□ -0.13
COL17A1-202ENST00000369733 COL13A1Q5TAT6 717 aaPredicted RBP14.26□□□□□ -0.13
COL17A1-202ENST00000369733 PP6455Q8WZ26 134 aa14.26□□□□□ -0.13
COL17A1-202ENST00000369733 MRGPRX3Q96LB0 322 aa14.26□□□□□ -0.13
COL17A1-202ENST00000369733 CLDN34H7C241 214 aa14.26□□□□□ -0.13
COL17A1-202ENST00000369733 NRG2O14511 850 aaPredicted RBP14.26□□□□□ -0.13
COL17A1-202ENST00000369733 SPP1P10451 314 aa14.26□□□□□ -0.13
COL17A1-202ENST00000369733 EDDM3AQ14507 147 aa14.26□□□□□ -0.13
COL17A1-202ENST00000369733 OVCH2Q7RTZ1 564 aa14.26□□□□□ -0.13
COL17A1-202ENST00000369733 NUBPLQ8TB37 319 aa14.26□□□□□ -0.13
COL17A1-202ENST00000369733 PBX4Q9BYU1 374 aa14.26□□□□□ -0.13
COL17A1-202ENST00000369733 MARF1Q9Y4F3 1742 aaKnown RBP14.26□□□□□ -0.13
COL17A1-202ENST00000369733 ZIC1Q15915 447 aa14.26□□□□□ -0.13
COL17A1-202ENST00000369733 ZNF574Q6ZN55 896 aaPredicted RBP14.26□□□□□ -0.13
COL17A1-202ENST00000369733 OR5AS1Q8N127 324 aa14.26□□□□□ -0.13
COL17A1-202ENST00000369733 RTL8AQ9BWD3 113 aa14.26□□□□□ -0.13
COL17A1-202ENST00000369733 CTSVO60911 334 aa14.26□□□□□ -0.13
COL17A1-202ENST00000369733 ARG1P05089 322 aa14.26□□□□□ -0.13
COL17A1-202ENST00000369733 EN2P19622 333 aaPredicted RBP14.26□□□□□ -0.13
COL17A1-202ENST00000369733 PCDHGA9Q9Y5G4 932 aaKnown RBP14.26□□□□□ -0.13
COL17A1-202ENST00000369733 DOCK1Q14185 1865 aa14.26□□□□□ -0.13
COL17A1-202ENST00000369733 IGHEP01854 428 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 ABCD3P28288 659 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 TMEM33P57088 247 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 IQCJQ1A5X6 159 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 FBXO46Q6PJ61 603 aaPredicted RBP14.25□□□□□ -0.13
COL17A1-202ENST00000369733 PRSS41Q7RTY9 318 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 TMED3Q9Y3Q3 217 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 GON4LQ3T8J9 2241 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 SIRPB1O00241 398 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 AQP7O14520 342 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 CDC14BO60729 498 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 YRDCQ86U90 279 aaKnown RBP14.25□□□□□ -0.13
COL17A1-202ENST00000369733 FAM210BQ96KR6 192 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 TMPRSS13Q9BYE2 586 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 ZNF275Q9NSD4 429 aaPredicted RBP14.25□□□□□ -0.13
COL17A1-202ENST00000369733 LPAR3Q9UBY5 353 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 ADAMTSL1Q8N6G6 1762 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 IGHV3-15A0A0B4J1V0 119 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 ANKUB1A6NFN9 424 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 EDDM3BP56851 147 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 KISS1Q15726 138 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 EXT1Q16394 746 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 TMEM104Q8NE00 496 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 RHBDD1Q8TEB9 315 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 UTP23Q9BRU9 249 aaKnown RBP14.25□□□□□ -0.13
COL17A1-202ENST00000369733 SOX7Q9BT81 388 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 SIRT4Q9Y6E7 314 aaPredicted RBP14.25□□□□□ -0.13
COL17A1-202ENST00000369733 CD27P26842 260 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 CXCL12P48061 93 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 GSK3AP49840 483 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 RANP62826 216 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms