RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 WIPI2Q9Y4P8 454 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 A0A1B0GTI1 187 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 ANKRD30BLA7E2S9 258 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 CLDN25C9JDP6 229 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 H3BSH0 61 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 J3QLW9 94 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 GMDSO60547 372 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 ZNF19P17023 458 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 KIR3DL2P43630 455 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 ETV1P50549 477 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 GALEQ14376 348 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 TBCEQ15813 527 aaPredicted RBP12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 WDR38Q5JTN6 314 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 CSNK2A3Q8NEV1 391 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 PAPOLGQ9BWT3 736 aaKnown RBP12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 SLC22A4Q9H015 551 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 ISG20L2Q9H9L3 353 aaKnown RBP12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 FGF20Q9NP95 211 aaPredicted RBP12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 TMEM106BQ9NUM4 274 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 ERGIC3Q9Y282 383 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 CYB5R3P00387 301 aaPredicted RBP12.71□□□□□ -0.37
SMPDL3A-201ENST00000368440 LIMS3P0CW19 117 aa12.71□□□□□ -0.37
SMPDL3A-201ENST00000368440 LIMS4P0CW20 117 aa12.71□□□□□ -0.37
SMPDL3A-201ENST00000368440 MYL12AP19105 171 aa12.71□□□□□ -0.37
SMPDL3A-201ENST00000368440 HOXA4Q00056 320 aaPredicted RBP12.71□□□□□ -0.37
SMPDL3A-201ENST00000368440 IRF3Q14653 427 aa12.71□□□□□ -0.37
SMPDL3A-201ENST00000368440 CNPY1Q3B7I2 92 aa12.71□□□□□ -0.37
SMPDL3A-201ENST00000368440 WDR86Q86TI4 376 aa12.71□□□□□ -0.37
SMPDL3A-201ENST00000368440 CLDND2Q8NHS1 167 aa12.71□□□□□ -0.37
SMPDL3A-201ENST00000368440 PELI1Q96FA3 418 aa12.71□□□□□ -0.37
SMPDL3A-201ENST00000368440 CDCA4Q9BXL8 241 aa12.71□□□□□ -0.37
SMPDL3A-201ENST00000368440 FGF23Q9GZV9 251 aaPredicted RBP12.71□□□□□ -0.37
SMPDL3A-201ENST00000368440 UFSP2Q9NUQ7 469 aa12.71□□□□□ -0.37
SMPDL3A-201ENST00000368440 RSL24D1Q9UHA3 163 aaKnown RBP12.71□□□□□ -0.37
SMPDL3A-201ENST00000368440 DIMT1Q9UNQ2 313 aaKnown RBP12.71□□□□□ -0.37
SMPDL3A-201ENST00000368440 ZNF850A8MQ14 1090 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 MYL12BO14950 172 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 IGHV4-31P0DP07 118 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 GATA4P43694 442 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 MAP2K3P46734 347 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 NANOS3P60323 173 aaKnown RBP12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 PRDX4Q13162 271 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 DOC2BQ14184 412 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 DMRTC1Q5HYR2 192 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 UBE2UQ5VVX9 321 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 CELF2-AS1Q8N7Q2 184 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 PIGCQ92535 297 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 ISOC1Q96CN7 298 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 CHCHD3Q9NX63 227 aaKnown RBP12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 NOP16Q9Y3C1 178 aaKnown RBP12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 DHRS3O75911 302 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 PTBP3O95758 552 aaKnown RBP12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 HEXAP06865 529 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 FAHP16930 419 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 DCKP27707 260 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 ACTA2P62736 377 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 ACTG2P63267 376 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 OR2G6Q5TZ20 316 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 PLPP7Q8NBV4 271 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 OR2G2Q8NGZ5 317 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 OR8S1Q8NH09 359 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 ITPKCQ96DU7 683 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 FUNDC2Q9BWH2 189 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 JAM3Q9BX67 310 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 INPP5EQ9NRR6 644 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 FRRS1LQ9P0K9 344 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 V9GYS6 101 aa12.7□□□□□ -0.38
SMPDL3A-201ENST00000368440 IRGMA1A4Y4 181 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 A6NIN4 97 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 E9PI62 339 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 TMEM178BH3BS89 294 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 LMX1BO60663 402 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 NOL3O60936 208 aaKnown RBP12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 ZNF205O95201 554 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 CST4P01036 141 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 IGHV2-70P01814 119 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 GRPP07492 148 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 ZNF16P17020 682 aaPredicted RBP12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 CCL1P22362 96 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 GNALP38405 381 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 SLC3A1Q07837 685 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 ARMCX4Q5H9R4 360 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 FAM201AQ5SY85 155 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 SYT6Q5T7P8 510 aaPredicted RBP12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 KCTD20Q7Z5Y7 419 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 KLBQ86Z14 1044 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 RDH10Q8IZV5 341 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 SYS1Q8N2H4 156 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 SEMA6DQ8NFY4 1073 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 OR14K1Q8NGZ2 314 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 HPSE2Q8WWQ2 592 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 FCGR1BQ92637 280 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 RAB1CQ92928 201 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 MND1Q9BWT6 205 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 PIGLQ9Y2B2 252 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 NPTNQ9Y639 398 aa12.69□□□□□ -0.38
SMPDL3A-201ENST00000368440 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.68□□□□□ -0.38
SMPDL3A-201ENST00000368440 ZNF816-ZNF321PA0A0X1KG74 233 aa12.68□□□□□ -0.38
SMPDL3A-201ENST00000368440 PNMA8CA0A1B0GUJ8 204 aa12.68□□□□□ -0.38
SMPDL3A-201ENST00000368440 ISPDA4D126 451 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms