RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 DNAJC27Q9NZQ0 273 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 ONECUT1Q9UBC0 465 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 FAM96BQ9Y3D0 163 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 MPC1Q9Y5U8 109 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 TGP01266 2768 aa13.16□□□□□ -0.3
CKS1B-202ENST00000368436 TMEM210A6NLX4 147 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 CST4P01036 141 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 H2BFMP0C1H6 154 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 MNAT1P51948 309 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 GUCA2AQ02747 115 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 TRIM25Q14258 630 aaKnown RBP13.15□□□□□ -0.3
CKS1B-202ENST00000368436 GK3PQ14409 553 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 TAF9Q16594 264 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 LRRC10Q5BKY1 277 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 FAM76BQ5HYJ3 339 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 ZNF788Q6ZQV5 615 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 C1orf122Q6ZSJ8 110 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 Q6ZSV7 163 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 DHFR2Q86XF0 187 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 FTMTQ8N4E7 242 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 OR10G2Q8NGC3 310 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 TEX47Q8TBZ9 253 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 OR5P3Q8WZ94 311 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 PGAM5Q96HS1 289 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 RAB3IPQ96QF0 476 aaPredicted RBP13.15□□□□□ -0.3
CKS1B-202ENST00000368436 RBM4BQ9BQ04 359 aaKnown RBP13.15□□□□□ -0.3
CKS1B-202ENST00000368436 RTL8AQ9BWD3 113 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 C16orf95Q9H693 158 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 ABCB9Q9NP78 766 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 BRD7Q9NPI1 651 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 ZNRD1Q9P1U0 126 aa13.15□□□□□ -0.3
CKS1B-202ENST00000368436 CAB39Q9Y376 341 aaPredicted RBP13.15□□□□□ -0.3
CKS1B-202ENST00000368436 ANXA2P2A6NMY6 339 aa13.14□□□□□ -0.31
CKS1B-202ENST00000368436 B2RBV5 119 aa13.14□□□□□ -0.31
CKS1B-202ENST00000368436 RNASEK-C17orf49H0YIS7 233 aa13.14□□□□□ -0.31
CKS1B-202ENST00000368436 FBP1P09467 338 aa13.14□□□□□ -0.31
CKS1B-202ENST00000368436 ACKR3P25106 362 aa13.14□□□□□ -0.31
CKS1B-202ENST00000368436 MS4A2Q01362 244 aa13.14□□□□□ -0.31
CKS1B-202ENST00000368436 PRDX4Q13162 271 aa13.14□□□□□ -0.31
CKS1B-202ENST00000368436 IKZF1Q13422 519 aa13.14□□□□□ -0.31
CKS1B-202ENST00000368436 GFOD2Q3B7J2 385 aa13.14□□□□□ -0.31
CKS1B-202ENST00000368436 FAM98BQ52LJ0 330 aaKnown RBP13.14□□□□□ -0.31
CKS1B-202ENST00000368436 IQCF1Q8N6M8 205 aa13.14□□□□□ -0.31
CKS1B-202ENST00000368436 OR5T2Q8NGG2 359 aa13.14□□□□□ -0.31
CKS1B-202ENST00000368436 OTOSQ8NHW6 89 aa13.14□□□□□ -0.31
CKS1B-202ENST00000368436 RPL3LQ92901 407 aaKnown RBP13.14□□□□□ -0.31
CKS1B-202ENST00000368436 TNFRSF14Q92956 283 aa13.14□□□□□ -0.31
CKS1B-202ENST00000368436 FEVQ99581 238 aa13.14□□□□□ -0.31
CKS1B-202ENST00000368436 FGF23Q9GZV9 251 aaPredicted RBP13.14□□□□□ -0.31
CKS1B-202ENST00000368436 WDR13Q9H1Z4 485 aa13.14□□□□□ -0.31
CKS1B-202ENST00000368436 SEMA6AQ9H2E6 1030 aa13.14□□□□□ -0.31
CKS1B-202ENST00000368436 SIRT7Q9NRC8 400 aa13.14□□□□□ -0.31
CKS1B-202ENST00000368436 ZNF850A8MQ14 1090 aa13.13□□□□□ -0.31
CKS1B-202ENST00000368436 NPFFO15130 113 aa13.13□□□□□ -0.31
CKS1B-202ENST00000368436 TSPAN9O75954 239 aa13.13□□□□□ -0.31
CKS1B-202ENST00000368436 LYNP07948 512 aa13.13□□□□□ -0.31
CKS1B-202ENST00000368436 SELLP14151 372 aa13.13□□□□□ -0.31
CKS1B-202ENST00000368436 KRT74Q7RTS7 529 aa13.13□□□□□ -0.31
CKS1B-202ENST00000368436 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.13□□□□□ -0.31
CKS1B-202ENST00000368436 ZNF454Q8N9F8 522 aa13.13□□□□□ -0.31
CKS1B-202ENST00000368436 ANGPTL6Q8NI99 470 aa13.13□□□□□ -0.31
CKS1B-202ENST00000368436 GIPC3Q8TF64 312 aa13.13□□□□□ -0.31
CKS1B-202ENST00000368436 OTULINQ96BN8 352 aa13.13□□□□□ -0.31
CKS1B-202ENST00000368436 MED30Q96HR3 178 aa13.13□□□□□ -0.31
CKS1B-202ENST00000368436 LYZL4Q96KX0 146 aa13.13□□□□□ -0.31
CKS1B-202ENST00000368436 GAFA1Q96PS6 74 aa13.13□□□□□ -0.31
CKS1B-202ENST00000368436 PKP2Q99959 881 aa13.13□□□□□ -0.31
CKS1B-202ENST00000368436 OR51V1Q9H2C8 321 aa13.13□□□□□ -0.31
CKS1B-202ENST00000368436 SNTG1Q9NSN8 517 aa13.13□□□□□ -0.31
CKS1B-202ENST00000368436 DNAJB11Q9UBS4 358 aa13.13□□□□□ -0.31
CKS1B-202ENST00000368436 VPREB3Q9UKI3 123 aa13.13□□□□□ -0.31
CKS1B-202ENST00000368436 NOTCH1P46531 2555 aa13.13□□□□□ -0.31
CKS1B-202ENST00000368436 ARRDC5A6NEK1 342 aa13.12□□□□□ -0.31
CKS1B-202ENST00000368436 H3BN98 237 aa13.12□□□□□ -0.31
CKS1B-202ENST00000368436 RAP2AP10114 183 aa13.12□□□□□ -0.31
CKS1B-202ENST00000368436 PAICSP22234 425 aaKnown RBP13.12□□□□□ -0.31
CKS1B-202ENST00000368436 EEF1B2P24534 225 aaKnown RBP13.12□□□□□ -0.31
CKS1B-202ENST00000368436 DCTDP32321 178 aa13.12□□□□□ -0.31
CKS1B-202ENST00000368436 DLX1P56177 255 aa13.12□□□□□ -0.31
CKS1B-202ENST00000368436 GNGT1P63211 74 aa13.12□□□□□ -0.31
CKS1B-202ENST00000368436 PRB3Q04118 309 aaPredicted RBP13.12□□□□□ -0.31
CKS1B-202ENST00000368436 DGUOKQ16854 277 aa13.12□□□□□ -0.31
CKS1B-202ENST00000368436 PLBD1Q6P4A8 553 aa13.12□□□□□ -0.31
CKS1B-202ENST00000368436 THEM6Q8WUY1 208 aa13.12□□□□□ -0.31
CKS1B-202ENST00000368436 HPSE2Q8WWQ2 592 aa13.12□□□□□ -0.31
CKS1B-202ENST00000368436 H1FXQ92522 213 aaKnown RBP13.12□□□□□ -0.31
CKS1B-202ENST00000368436 PIGCQ92535 297 aa13.12□□□□□ -0.31
CKS1B-202ENST00000368436 RNF170Q96K19 258 aa13.12□□□□□ -0.31
CKS1B-202ENST00000368436 TCF7L1Q9HCS4 588 aa13.12□□□□□ -0.31
CKS1B-202ENST00000368436 SLC25A10Q9UBX3 287 aaPredicted RBP13.12□□□□□ -0.31
CKS1B-202ENST00000368436 ZNF391Q9UJN7 358 aa13.12□□□□□ -0.31
CKS1B-202ENST00000368436 BTBD17A6NE02 478 aa13.11□□□□□ -0.31
CKS1B-202ENST00000368436 NKX6-3A6NJ46 265 aa13.11□□□□□ -0.31
CKS1B-202ENST00000368436 SLC22A31A6NKX4 558 aa13.11□□□□□ -0.31
CKS1B-202ENST00000368436 PRR23D1E9PI22 279 aaPredicted RBP13.11□□□□□ -0.31
CKS1B-202ENST00000368436 M0R1W7 72 aa13.11□□□□□ -0.31
CKS1B-202ENST00000368436 SIGLEC5O15389 551 aa13.11□□□□□ -0.31
CKS1B-202ENST00000368436 AKR7A2O43488 359 aa13.11□□□□□ -0.31
CKS1B-202ENST00000368436 SELENOFO60613 162 aa13.11□□□□□ -0.31
CKS1B-202ENST00000368436 ACAA1P09110 424 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms