RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 MSRB3Q8IXL7 192 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 OR10P1Q8NGE3 313 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 COX14Q96I36 57 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 MOGAT1Q96PD6 335 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 SCPEP1Q9HB40 452 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 ZFP64Q9NPA5 681 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 V9GYS6 101 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 ERHP84090 104 aaKnown RBP11.53□□□□□ -0.56
PTPRK-207ENST00000368226 CD276Q5ZPR3 534 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 PRR27Q6MZM9 219 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 BTLAQ7Z6A9 289 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 RELL2Q8NC24 303 aaPredicted RBP11.53□□□□□ -0.56
PTPRK-207ENST00000368226 KCNK15Q9H427 330 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 NPAP1Q9NZP6 1156 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 ADH4P08319 380 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 FAM74A1Q5RGS3 127 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 CADM3Q8N126 398 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 OR8U1Q8NH10 309 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 ADAM19Q9H013 955 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 ATG2BQ96BY7 2078 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 EPXP11678 715 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 MESP2Q0VG99 397 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 GPNMBQ14956 572 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 KIAA0040Q15053 153 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 CALHM3Q86XJ0 350 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 OR4C16Q8NGL9 310 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 M0R1X1 148 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 CSN1S1P47710 185 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 TSEN54Q7Z6J9 526 aaKnown RBP11.53□□□□□ -0.56
PTPRK-207ENST00000368226 CDH26Q8IXH8 852 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 SMRP1Q8NCR6 262 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 APH1BQ8WW43 257 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 OR8B4Q96RC9 309 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 RCL1Q9Y2P8 373 aaKnown RBP11.53□□□□□ -0.56
PTPRK-207ENST00000368226 MCM3APO60318 1980 aa11.52□□□□□ -0.56
PTPRK-207ENST00000368226 LIMK1P53667 647 aa11.52□□□□□ -0.56
PTPRK-207ENST00000368226 BAK1Q16611 211 aa11.52□□□□□ -0.56
PTPRK-207ENST00000368226 DRAM2Q6UX65 266 aa11.52□□□□□ -0.56
PTPRK-207ENST00000368226 OR52N4Q8NGI2 321 aa11.52□□□□□ -0.56
PTPRK-207ENST00000368226 LRRC3BQ96PB8 259 aa11.52□□□□□ -0.56
PTPRK-207ENST00000368226 DLL4Q9NR61 685 aa11.52□□□□□ -0.56
PTPRK-207ENST00000368226 TCFL5Q9UL49 500 aa11.52□□□□□ -0.56
PTPRK-207ENST00000368226 ARRDC5A6NEK1 342 aa11.52□□□□□ -0.56
PTPRK-207ENST00000368226 ONECUT2O95948 504 aa11.52□□□□□ -0.56
PTPRK-207ENST00000368226 CTRB1P17538 263 aa11.52□□□□□ -0.56
PTPRK-207ENST00000368226 TMEM41BQ5BJD5 291 aa11.52□□□□□ -0.56
PTPRK-207ENST00000368226 CTRB2Q6GPI1 263 aa11.52□□□□□ -0.56
PTPRK-207ENST00000368226 RPUSD4Q96CM3 377 aaKnown RBP11.52□□□□□ -0.56
PTPRK-207ENST00000368226 YIPF6Q96EC8 236 aa11.52□□□□□ -0.56
PTPRK-207ENST00000368226 DOK1Q99704 481 aa11.52□□□□□ -0.56
PTPRK-207ENST00000368226 ZNF835Q9Y2P0 537 aa11.52□□□□□ -0.56
PTPRK-207ENST00000368226 ZNF354AO60765 605 aaPredicted RBP11.52□□□□□ -0.57
PTPRK-207ENST00000368226 TMIGD3P0DMS9 266 aaPredicted RBP11.52□□□□□ -0.57
PTPRK-207ENST00000368226 GABRB1P18505 474 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 ADRA2CP18825 462 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 CDKN2AP42771 156 aaKnown RBP11.52□□□□□ -0.57
PTPRK-207ENST00000368226 OR3A4PP47883 348 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 C1QL3Q5VWW1 255 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 RTN4IP1Q8WWV3 396 aaPredicted RBP11.52□□□□□ -0.57
PTPRK-207ENST00000368226 PLAC1Q9HBJ0 212 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 ZNHIT1O43257 154 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 KRASP01116 189 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 OPN1MWP04001 364 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 PRR35P0CG20 571 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 OPN1MW2P0DN77 364 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 OPN1MW3P0DN78 364 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 CEACAM6P40199 344 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 RAB35Q15286 201 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 MICBQ29980 383 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 DUSP21Q9H596 190 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 KCNIP2Q9NS61 270 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 TAAR3PQ9P1P4 343 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 COL4A1P02462 1669 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 IGHV5-10-1A0A0J9YXX1 117 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 OR5H14A6NHG9 310 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 THBS4P35443 961 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 RNPS1Q15287 305 aaKnown RBP11.52□□□□□ -0.57
PTPRK-207ENST00000368226 UBE3DQ7Z6J8 389 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 C17orf78Q8N4C9 275 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 DYNC2LI1Q8TCX1 351 aa11.52□□□□□ -0.57
PTPRK-207ENST00000368226 FGF20Q9NP95 211 aaPredicted RBP11.52□□□□□ -0.57
PTPRK-207ENST00000368226 SLC31A2O15432 143 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 RPL12P30050 165 aaKnown RBP11.51□□□□□ -0.57
PTPRK-207ENST00000368226 OR6S1Q8NH40 331 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 DUS3LQ96G46 650 aaKnown RBP11.51□□□□□ -0.57
PTPRK-207ENST00000368226 FAAP24Q9BTP7 215 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 STRAPQ9Y3F4 350 aaKnown RBP11.51□□□□□ -0.57
PTPRK-207ENST00000368226 EVX1P49640 407 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 ARHGAP5-AS1Q96IT6 56 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 ZNF251Q9BRH9 671 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 SOX7Q9BT81 388 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 UBTD1Q9HAC8 227 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 CROCCQ5TZA2 2017 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 UBE2L5PA0A1B0GUS4 154 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 DCTN6O00399 190 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 FABP1P07148 127 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 RAB5CP51148 216 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 GPX8Q8TED1 209 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 MARC2Q969Z3 335 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 RBP4P02753 201 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms