RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 NHLH1Q02575 133 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 EIF2S3LQ2VIR3 472 aaKnown RBP13.01□□□□□ -0.33
PRKN-204ENST00000366896 AWAT2Q6E213 333 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 TMPPEQ6ZT21 453 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 RTN4RL2Q86UN3 420 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 SLC22A24Q8N4F4 322 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 GVQW1Q8N7I0 195 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 ARL5BQ96KC2 179 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 FN3KRPQ9HA64 309 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 NIT2Q9NQR4 276 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 FAM206AQ9NX38 181 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 KLHL13Q9P2N7 655 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 PCDHGA1Q9Y5H4 931 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 NPIPA5E9PKD4 350 aa13□□□□□ -0.33
PRKN-204ENST00000366896 FOLR1P15328 257 aa13□□□□□ -0.33
PRKN-204ENST00000366896 ZNF44P15621 663 aa13□□□□□ -0.33
PRKN-204ENST00000366896 OR52W1Q6IF63 320 aa13□□□□□ -0.33
PRKN-204ENST00000366896 MICU1Q9BPX6 476 aa13□□□□□ -0.33
PRKN-204ENST00000366896 MED29Q9NX70 200 aa13□□□□□ -0.33
PRKN-204ENST00000366896 NPIPA1Q9UND3 350 aa13□□□□□ -0.33
PRKN-204ENST00000366896 TNFSF12-TNFSF13A0A0A6YY99 330 aa13□□□□□ -0.33
PRKN-204ENST00000366896 MSGN1A6NI15 193 aa13□□□□□ -0.33
PRKN-204ENST00000366896 CD5P06127 495 aa13□□□□□ -0.33
PRKN-204ENST00000366896 H2BFMP0C1H6 154 aa13□□□□□ -0.33
PRKN-204ENST00000366896 LYL1P12980 280 aa13□□□□□ -0.33
PRKN-204ENST00000366896 CBR1P16152 277 aa13□□□□□ -0.33
PRKN-204ENST00000366896 ZFP36L1Q07352 338 aaKnown RBP13□□□□□ -0.33
PRKN-204ENST00000366896 RBM39Q14498 530 aaKnown RBP13□□□□□ -0.33
PRKN-204ENST00000366896 RNF212Q495C1 297 aa13□□□□□ -0.33
PRKN-204ENST00000366896 ZNF585AQ6P3V2 769 aa13□□□□□ -0.33
PRKN-204ENST00000366896 NAA40Q86UY6 237 aa13□□□□□ -0.33
PRKN-204ENST00000366896 OR51M1Q9H341 326 aa13□□□□□ -0.33
PRKN-204ENST00000366896 CNTD2Q9H8S5 307 aa13□□□□□ -0.33
PRKN-204ENST00000366896 SLC5A6Q9Y289 635 aa13□□□□□ -0.33
PRKN-204ENST00000366896 WIF1Q9Y5W5 379 aa13□□□□□ -0.33
PRKN-204ENST00000366896 S100A6P06703 90 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 HRH1P35367 487 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 F2RL1P55085 397 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 C17orf67Q0P5P2 114 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.99□□□□□ -0.33
PRKN-204ENST00000366896 HIST1H2BAQ96A08 127 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 ZNF775Q96BV0 537 aaPredicted RBP12.99□□□□□ -0.33
PRKN-204ENST00000366896 FGGYQ96C11 551 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 C14orf79Q96F83 325 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 CENPMQ9NSP4 180 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 ANAPC10Q9UM13 185 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 FER1L5A0AVI2 2057 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 ZNF354AO60765 605 aaPredicted RBP12.99□□□□□ -0.33
PRKN-204ENST00000366896 TAS2R31P59538 309 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 UNC119Q13432 240 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 TRA2AQ13595 282 aaKnown RBP eCLIP12.99□□□□□ -0.33
PRKN-204ENST00000366896 SGCAQ16586 387 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 PRSS54Q6PEW0 395 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 RNF138Q8WVD3 245 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 TCEAL7Q9BRU2 100 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 MOB1AQ9H8S9 216 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 CHST11Q9NPF2 352 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 ASH2LQ9UBL3 628 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 B3GALT5Q9Y2C3 310 aa12.99□□□□□ -0.33
PRKN-204ENST00000366896 A0A1B0GX78 115 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 A0A1W2PNV4 684 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 TMEM14DPA8MWL7 114 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 SHISA8B8ZZ34 492 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 FAM157AC9JC47 383 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 MFNGO00587 321 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 TTRP02766 147 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 CHRM2P08172 466 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 FCGR3AP08637 254 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 RCC1P18754 421 aaPredicted RBP12.98□□□□□ -0.33
PRKN-204ENST00000366896 AGAP20933 346 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 PPT1P50897 306 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 HSF1Q00613 529 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 POU3F1Q03052 451 aaPredicted RBP12.98□□□□□ -0.33
PRKN-204ENST00000366896 TRIP6Q15654 476 aaKnown RBP12.98□□□□□ -0.33
PRKN-204ENST00000366896 ZNF600Q6ZNG1 722 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 OR52N4Q8NGI2 321 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 ZNF501Q96CX3 271 aaPredicted RBP12.98□□□□□ -0.33
PRKN-204ENST00000366896 AQP10Q96PS8 301 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 CLCC1Q96S66 551 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 METTL1Q9UBP6 276 aaKnown RBP12.98□□□□□ -0.33
PRKN-204ENST00000366896 PCNX2A6NKB5 2137 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 CEACAM18A8MTB9 384 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 S100PP25815 95 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 LPAR6P43657 344 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 FBXW4P57775 412 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 HGFACQ04756 655 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 HOGA1Q86XE5 327 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 ZNF561Q8N587 486 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 DEFB124Q8NES8 71 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 OR5D14Q8NGL3 314 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 NUBPLQ8TB37 319 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 THAP3Q8WTV1 239 aaPredicted RBP12.98□□□□□ -0.33
PRKN-204ENST00000366896 ROBO4Q8WZ75 1007 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 DDIT4LQ96D03 193 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 ADAT3Q96EY9 351 aaPredicted RBP12.98□□□□□ -0.33
PRKN-204ENST00000366896 TGIF2Q9GZN2 237 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 PTGES2Q9H7Z7 377 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 FGF21Q9NSA1 209 aa12.98□□□□□ -0.33
PRKN-204ENST00000366896 ZFHX2Q9C0A1 2572 aaPredicted RBP12.98□□□□□ -0.33
PRKN-204ENST00000366896 FBXO24O75426 580 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms