RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 SPSB1Q96BD6 273 aa18.11■□□□□ 0.49
MAP1LC3A-201ENST00000360668 ZC3HAV1LQ96H79 300 aaKnown RBP18.11■□□□□ 0.49
MAP1LC3A-201ENST00000360668 NKX3-1Q99801 234 aaPredicted RBP18.11■□□□□ 0.49
MAP1LC3A-201ENST00000360668 PTTG3PQ9NZH4 202 aa18.11■□□□□ 0.49
MAP1LC3A-201ENST00000360668 TMEM272A0A1B0GTI8 110 aa18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 EEF1E1-BLOC1S5C9J1V9 151 aa18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 EEF1E1O43324 174 aaKnown RBP18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 GMDSO60547 372 aa18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 BPNT1O95861 308 aa18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 SPNP16150 400 aa18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 INPP1P49441 399 aa18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 MRPS10P82664 201 aaKnown RBP18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 MADCAM1Q13477 382 aa18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 CNN3Q15417 329 aaKnown RBP18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 RFPL4BQ6ZWI9 263 aa18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 NRARPQ7Z6K4 114 aa18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 STEAP2Q8NFT2 490 aa18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 RND1Q92730 232 aa18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 PTX4Q96A99 478 aa18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 TECTBQ96PL2 329 aa18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 GPR173Q9NS66 373 aa18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 ELOVL5Q9NYP7 299 aa18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 JKAMPQ9P055 326 aa18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 MEMO1Q9Y316 297 aa18.1■□□□□ 0.49
MAP1LC3A-201ENST00000360668 LDLRAD4O15165 306 aa18.09■□□□□ 0.49
MAP1LC3A-201ENST00000360668 SMPD2O60906 423 aa18.09■□□□□ 0.49
MAP1LC3A-201ENST00000360668 NRASP01111 189 aa18.09■□□□□ 0.49
MAP1LC3A-201ENST00000360668 PRKACBP22694 351 aa18.09■□□□□ 0.49
MAP1LC3A-201ENST00000360668 CA7P43166 264 aa18.09■□□□□ 0.49
MAP1LC3A-201ENST00000360668 TAB1Q15750 504 aa18.09■□□□□ 0.49
MAP1LC3A-201ENST00000360668 ZNF554Q86TJ5 538 aa18.09■□□□□ 0.49
MAP1LC3A-201ENST00000360668 CSNK2A3Q8NEV1 391 aa18.09■□□□□ 0.49
MAP1LC3A-201ENST00000360668 UBASH3BQ8TF42 649 aa18.09■□□□□ 0.49
MAP1LC3A-201ENST00000360668 PIGTQ969N2 578 aa18.09■□□□□ 0.49
MAP1LC3A-201ENST00000360668 S100PBPQ96BU1 408 aa18.09■□□□□ 0.49
MAP1LC3A-201ENST00000360668 USB1Q9BQ65 265 aaKnown RBP18.09■□□□□ 0.49
MAP1LC3A-201ENST00000360668 C11orf54Q9H0W9 315 aaPredicted RBP18.09■□□□□ 0.49
MAP1LC3A-201ENST00000360668 POFUT1Q9H488 388 aa18.09■□□□□ 0.49
MAP1LC3A-201ENST00000360668 RBFOX1Q9NWB1 397 aaKnown RBP18.09■□□□□ 0.49
MAP1LC3A-201ENST00000360668 KCNN3Q9UGI6 736 aa18.09■□□□□ 0.49
MAP1LC3A-201ENST00000360668 ZNF462Q96JM2 2506 aa18.09■□□□□ 0.49
MAP1LC3A-201ENST00000360668 SHANK1Q9Y566 2161 aa18.09■□□□□ 0.49
MAP1LC3A-201ENST00000360668 TRGV8A0A0C4DH27 118 aa18.08■□□□□ 0.49
MAP1LC3A-201ENST00000360668 B8ZZF3 427 aa18.08■□□□□ 0.49
MAP1LC3A-201ENST00000360668 PRSS12P56730 875 aa18.08■□□□□ 0.49
MAP1LC3A-201ENST00000360668 PLA2G7Q13093 441 aa18.08■□□□□ 0.49
MAP1LC3A-201ENST00000360668 KISS1Q15726 138 aa18.08■□□□□ 0.49
MAP1LC3A-201ENST00000360668 C3orf36Q3SXR2 165 aa18.08■□□□□ 0.49
MAP1LC3A-201ENST00000360668 NCCRP1Q6ZVX7 275 aaPredicted RBP18.08■□□□□ 0.49
MAP1LC3A-201ENST00000360668 DTX3Q8N9I9 347 aa18.08■□□□□ 0.49
MAP1LC3A-201ENST00000360668 DUSP18Q8NEJ0 188 aa18.08■□□□□ 0.49
MAP1LC3A-201ENST00000360668 OR56B2PQ8NGI1 322 aa18.08■□□□□ 0.49
MAP1LC3A-201ENST00000360668 CHAC2Q8WUX2 184 aa18.08■□□□□ 0.49
MAP1LC3A-201ENST00000360668 CPNE2Q96FN4 548 aaPredicted RBP18.08■□□□□ 0.49
MAP1LC3A-201ENST00000360668 SPACA5Q96QH8 159 aa18.08■□□□□ 0.49
MAP1LC3A-201ENST00000360668 C1QTNF6Q9BXI9 259 aa18.08■□□□□ 0.49
MAP1LC3A-201ENST00000360668 FBLN5Q9UBX5 448 aa18.08■□□□□ 0.49
MAP1LC3A-201ENST00000360668 GGT3PA6NGU5 568 aa18.08■□□□□ 0.48
MAP1LC3A-201ENST00000360668 CECR9P0C854 216 aa18.08■□□□□ 0.48
MAP1LC3A-201ENST00000360668 ZNF35P13682 527 aa18.08■□□□□ 0.48
MAP1LC3A-201ENST00000360668 RAB6AP20340 208 aa18.08■□□□□ 0.48
MAP1LC3A-201ENST00000360668 EFNB2P52799 333 aa18.08■□□□□ 0.48
MAP1LC3A-201ENST00000360668 HLXQ14774 488 aaPredicted RBP18.08■□□□□ 0.48
MAP1LC3A-201ENST00000360668 AWAT2Q6E213 333 aa18.08■□□□□ 0.48
MAP1LC3A-201ENST00000360668 ANGPTL5Q86XS5 388 aa18.08■□□□□ 0.48
MAP1LC3A-201ENST00000360668 LIX1LQ8IVB5 337 aa18.08■□□□□ 0.48
MAP1LC3A-201ENST00000360668 CADM3Q8N126 398 aa18.08■□□□□ 0.48
MAP1LC3A-201ENST00000360668 PNLDC1Q8NA58 520 aaKnown RBP18.08■□□□□ 0.48
MAP1LC3A-201ENST00000360668 RELL2Q8NC24 303 aaPredicted RBP18.08■□□□□ 0.48
MAP1LC3A-201ENST00000360668 TRIM63Q969Q1 353 aa18.08■□□□□ 0.48
MAP1LC3A-201ENST00000360668 GPER1Q99527 375 aa18.08■□□□□ 0.48
MAP1LC3A-201ENST00000360668 KCNK15Q9H427 330 aa18.08■□□□□ 0.48
MAP1LC3A-201ENST00000360668 MRPS28Q9Y2Q9 187 aaKnown RBP18.08■□□□□ 0.48
MAP1LC3A-201ENST00000360668 LYRM1O43325 122 aa18.07■□□□□ 0.48
MAP1LC3A-201ENST00000360668 CTAG2O75638 210 aa18.07■□□□□ 0.48
MAP1LC3A-201ENST00000360668 CST4P01036 141 aa18.07■□□□□ 0.48
MAP1LC3A-201ENST00000360668 UBBP0CG47 229 aa18.07■□□□□ 0.48
MAP1LC3A-201ENST00000360668 UCP2P55851 309 aa18.07■□□□□ 0.48
MAP1LC3A-201ENST00000360668 PPP1CBP62140 327 aa18.07■□□□□ 0.48
MAP1LC3A-201ENST00000360668 UNQ6126/PRO20091Q6UXV3 157 aa18.07■□□□□ 0.48
MAP1LC3A-201ENST00000360668 FBXW12Q6X9E4 464 aa18.07■□□□□ 0.48
MAP1LC3A-201ENST00000360668 RNF144BQ7Z419 303 aa18.07■□□□□ 0.48
MAP1LC3A-201ENST00000360668 FTMTQ8N4E7 242 aa18.07■□□□□ 0.48
MAP1LC3A-201ENST00000360668 NPRL2Q8WTW4 380 aa18.07■□□□□ 0.48
MAP1LC3A-201ENST00000360668 MUCL1Q96DR8 90 aa18.07■□□□□ 0.48
MAP1LC3A-201ENST00000360668 C7orf50Q9BRJ6 194 aaKnown RBP18.07■□□□□ 0.48
MAP1LC3A-201ENST00000360668 ACTR6Q9GZN1 396 aa18.07■□□□□ 0.48
MAP1LC3A-201ENST00000360668 RAB22AQ9UL26 194 aa18.07■□□□□ 0.48
MAP1LC3A-201ENST00000360668 FASNP49327 2511 aaKnown RBP18.07■□□□□ 0.48
MAP1LC3A-201ENST00000360668 IGHV1-18A0A0C4DH31 117 aa18.06■□□□□ 0.48
MAP1LC3A-201ENST00000360668 TUBG1P23258 451 aa18.06■□□□□ 0.48
MAP1LC3A-201ENST00000360668 CDK2P24941 298 aa18.06■□□□□ 0.48
MAP1LC3A-201ENST00000360668 ALDH3B1P43353 468 aa18.06■□□□□ 0.48
MAP1LC3A-201ENST00000360668 OR3A4PP47883 348 aa18.06■□□□□ 0.48
MAP1LC3A-201ENST00000360668 QRFPP83859 136 aa18.06■□□□□ 0.48
MAP1LC3A-201ENST00000360668 FAM27E3Q08E93 113 aa18.06■□□□□ 0.48
MAP1LC3A-201ENST00000360668 TMEM69Q5SWH9 247 aa18.06■□□□□ 0.48
MAP1LC3A-201ENST00000360668 CRIP3Q6Q6R5 217 aa18.06■□□□□ 0.48
MAP1LC3A-201ENST00000360668 LHFPL2Q6ZUX7 228 aa18.06■□□□□ 0.48
MAP1LC3A-201ENST00000360668 PIGCQ92535 297 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms