RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 GTF3AQ92664 365 aaKnown RBP10.56□□□□□ -0.72
NIF3L1-201ENST00000359683 TRMT61AQ96FX7 289 aaKnown RBP10.56□□□□□ -0.72
NIF3L1-201ENST00000359683 PAPOLGQ9BWT3 736 aaKnown RBP10.56□□□□□ -0.72
NIF3L1-201ENST00000359683 CHST5Q9GZS9 411 aa10.56□□□□□ -0.72
NIF3L1-201ENST00000359683 PPIL3Q9H2H8 161 aaKnown RBP10.56□□□□□ -0.72
NIF3L1-201ENST00000359683 PPP1R3EQ9H7J1 279 aa10.56□□□□□ -0.72
NIF3L1-201ENST00000359683 NOX4Q9NPH5 578 aa10.56□□□□□ -0.72
NIF3L1-201ENST00000359683 STUB1Q9UNE7 303 aa10.56□□□□□ -0.72
NIF3L1-201ENST00000359683 LAMP3Q9UQV4 416 aa10.56□□□□□ -0.72
NIF3L1-201ENST00000359683 AKAP6Q13023 2319 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 ANKRD61A6NGH8 418 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 ZNF850A8MQ14 1090 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 C17orf100A8MU93 164 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 MLNRO43193 412 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 UCHL1P09936 223 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 NAT2P11245 290 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 IGFBP3P17936 291 aaPredicted RBP10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 GADD45AP24522 165 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 PPOXP50336 477 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 ZNF81P51508 661 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 KRTAP10-9P60411 292 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 PRDX4Q13162 271 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 UBE2V2Q15819 145 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 PAMR1Q6UXH9 720 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 GDPGP1Q6ZNW5 385 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 GPR141Q7Z602 305 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 OR5D14Q8NGL3 314 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 DIRC2Q96SL1 478 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 FUNDC2Q9BWH2 189 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 OR51E2Q9H255 320 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 ZCCHC4Q9H5U6 513 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 ABCB9Q9NP78 766 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 ZDHHC8Q9ULC8 765 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 NOP16Q9Y3C1 178 aaKnown RBP10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 PDZD2O15018 2839 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 IGKV1-9A0A0C4DH69 117 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 A0A1W2PPK0 400 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 H0YL77 283 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 OVOL3O00110 214 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 IGHV1-46P01743 117 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 BMP4P12644 408 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 ATF1P18846 271 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 GNALP38405 381 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 BLMHQ13867 455 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 CEACAM21Q3KPI0 293 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 FAM27D1Q5T7N8 215 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 MOB3CQ70IA8 216 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 ZDHHC23Q8IYP9 409 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 SPERTQ8NA61 448 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 OR5A2Q8NGI9 324 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 OR5P3Q8WZ94 311 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 ORAI1Q96D31 301 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 ITPKCQ96DU7 683 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 TECTBQ96PL2 329 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 DYNLRB1Q9NP97 96 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 GPR173Q9NS66 373 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 NKIRAS2Q9NYR9 191 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 ITGB1BP2Q9UKP3 347 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 SSR3Q9UNL2 185 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 FOXJ3Q9UPW0 622 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 PMF1-BGLAPU3KQ54 211 aa10.55□□□□□ -0.72
NIF3L1-201ENST00000359683 OTOGQ6ZRI0 2925 aa10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 CSMD2Q7Z408 3487 aa10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 SPG11Q96JI7 2443 aa10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 ANXA2P2A6NMY6 339 aa10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 SPRY3O43610 288 aa10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 ARL6IP5O75915 188 aa10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 CD55P08174 381 aa10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 FSTP19883 344 aa10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 OR8G1Q15617 311 aa10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 TIMM50Q3ZCQ8 353 aa10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 ANKRD13BQ86YJ7 626 aa10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 ZCCHC24Q8N2G6 241 aaKnown RBP10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 OR2Z1Q8NG97 314 aa10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 HPSE2Q8WWQ2 592 aa10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 HIST1H2AAQ96QV6 131 aa10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 ADAT1Q9BUB4 502 aaKnown RBP10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 FGF23Q9GZV9 251 aaPredicted RBP10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 LIME1Q9H400 295 aa10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 TXNL4BQ9NX01 149 aaKnown RBP10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 TAS2R4Q9NYW5 299 aa10.54□□□□□ -0.72
NIF3L1-201ENST00000359683 MED13LQ71F56 2210 aa10.53□□□□□ -0.72
NIF3L1-201ENST00000359683 TRAV8-7A0A075B6U6 113 aa10.53□□□□□ -0.72
NIF3L1-201ENST00000359683 H7C417 338 aa10.53□□□□□ -0.72
NIF3L1-201ENST00000359683 AIREO43918 545 aa10.53□□□□□ -0.72
NIF3L1-201ENST00000359683 PTBP3O95758 552 aaKnown RBP10.53□□□□□ -0.72
NIF3L1-201ENST00000359683 SRMP19623 302 aa10.53□□□□□ -0.72
NIF3L1-201ENST00000359683 RAB3AP20336 220 aa10.53□□□□□ -0.72
NIF3L1-201ENST00000359683 CD200P41217 278 aa10.53□□□□□ -0.72
NIF3L1-201ENST00000359683 MAB21L1Q13394 359 aa10.53□□□□□ -0.72
NIF3L1-201ENST00000359683 PCGF3Q3KNV8 242 aa10.53□□□□□ -0.72
NIF3L1-201ENST00000359683 HSD17B12Q53GQ0 312 aa10.53□□□□□ -0.72
NIF3L1-201ENST00000359683 FAM76BQ5HYJ3 339 aa10.53□□□□□ -0.72
NIF3L1-201ENST00000359683 DMRTC1Q5HYR2 192 aa10.53□□□□□ -0.72
NIF3L1-201ENST00000359683 CEP78Q5JTW2 689 aa10.53□□□□□ -0.72
NIF3L1-201ENST00000359683 FAM209AQ5JX71 171 aa10.53□□□□□ -0.72
NIF3L1-201ENST00000359683 PLCXD3Q63HM9 321 aa10.53□□□□□ -0.72
NIF3L1-201ENST00000359683 SATL1Q86VE3 508 aa10.53□□□□□ -0.72
NIF3L1-201ENST00000359683 CELF2-AS1Q8N7Q2 184 aa10.53□□□□□ -0.72
NIF3L1-201ENST00000359683 DNAAF1Q8NEP3 725 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms