RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 COMMD4Q9H0A8 199 aa20.54■□□□□ 0.88
ALKAL1-201ENST00000358543 HHLA2Q9UM44 414 aa20.54■□□□□ 0.88
ALKAL1-201ENST00000358543 PPP1R3CQ9UQK1 317 aa20.54■□□□□ 0.88
ALKAL1-201ENST00000358543 LRRC42Q9Y546 428 aa20.54■□□□□ 0.88
ALKAL1-201ENST00000358543 LOC100289279A0A1B0GTE1 492 aa20.53■□□□□ 0.88
ALKAL1-201ENST00000358543 TRIM64A6NGJ6 449 aa20.53■□□□□ 0.88
ALKAL1-201ENST00000358543 TRIM64BA6NI03 449 aa20.53■□□□□ 0.88
ALKAL1-201ENST00000358543 LALBAP00709 142 aa20.53■□□□□ 0.88
ALKAL1-201ENST00000358543 FAHP16930 419 aa20.53■□□□□ 0.88
ALKAL1-201ENST00000358543 CDH15P55291 814 aa20.53■□□□□ 0.88
ALKAL1-201ENST00000358543 TAS2R43P59537 309 aa20.53■□□□□ 0.88
ALKAL1-201ENST00000358543 GABARAPL2P60520 117 aa20.53■□□□□ 0.88
ALKAL1-201ENST00000358543 ZNF181Q2M3W8 571 aa20.53■□□□□ 0.88
ALKAL1-201ENST00000358543 CLVS2Q5SYC1 327 aa20.53■□□□□ 0.88
ALKAL1-201ENST00000358543 XAF1Q6GPH4 301 aa20.53■□□□□ 0.88
ALKAL1-201ENST00000358543 Q8TCH9 128 aa20.53■□□□□ 0.88
ALKAL1-201ENST00000358543 OR5P3Q8WZ94 311 aa20.53■□□□□ 0.88
ALKAL1-201ENST00000358543 DVL3Q92997 716 aaPredicted RBP20.53■□□□□ 0.88
ALKAL1-201ENST00000358543 HIST1H2AAQ96QV6 131 aa20.53■□□□□ 0.88
ALKAL1-201ENST00000358543 PPP1R3EQ9H7J1 279 aa20.53■□□□□ 0.88
ALKAL1-201ENST00000358543 CACNG2Q9Y698 323 aa20.53■□□□□ 0.88
ALKAL1-201ENST00000358543 MRPS14O60783 128 aaKnown RBP20.52■□□□□ 0.88
ALKAL1-201ENST00000358543 NR4A2P43354 598 aa20.52■□□□□ 0.88
ALKAL1-201ENST00000358543 ACSM1Q08AH1 577 aa20.52■□□□□ 0.88
ALKAL1-201ENST00000358543 CEACAM21Q3KPI0 293 aa20.52■□□□□ 0.88
ALKAL1-201ENST00000358543 SMIM19Q96E16 107 aa20.52■□□□□ 0.88
ALKAL1-201ENST00000358543 PDCD1LG2Q9BQ51 273 aa20.52■□□□□ 0.88
ALKAL1-201ENST00000358543 REG4Q9BYZ8 158 aa20.52■□□□□ 0.88
ALKAL1-201ENST00000358543 PLEKHA1Q9HB21 404 aa20.52■□□□□ 0.88
ALKAL1-201ENST00000358543 TMEM106BQ9NUM4 274 aa20.52■□□□□ 0.88
ALKAL1-201ENST00000358543 SIRT4Q9Y6E7 314 aaPredicted RBP20.52■□□□□ 0.88
ALKAL1-201ENST00000358543 DYSFO75923 2080 aa20.52■□□□□ 0.87
ALKAL1-201ENST00000358543 NRASP01111 189 aa20.51■□□□□ 0.87
ALKAL1-201ENST00000358543 EEF1B2P24534 225 aaKnown RBP20.51■□□□□ 0.87
ALKAL1-201ENST00000358543 BDH1Q02338 343 aa20.51■□□□□ 0.87
ALKAL1-201ENST00000358543 FAM76BQ5HYJ3 339 aa20.51■□□□□ 0.87
ALKAL1-201ENST00000358543 DMKNQ6E0U4 476 aaPredicted RBP20.51■□□□□ 0.87
ALKAL1-201ENST00000358543 OR5A2Q8NGI9 324 aa20.51■□□□□ 0.87
ALKAL1-201ENST00000358543 RTL8AQ9BWD3 113 aa20.51■□□□□ 0.87
ALKAL1-201ENST00000358543 BPESC1Q9GZL8 116 aa20.51■□□□□ 0.87
ALKAL1-201ENST00000358543 LSM2Q9Y333 95 aaKnown RBP20.51■□□□□ 0.87
ALKAL1-201ENST00000358543 TANC2Q9HCD6 1990 aa20.51■□□□□ 0.87
ALKAL1-201ENST00000358543 TMEM210A6NLX4 147 aa20.5■□□□□ 0.87
ALKAL1-201ENST00000358543 CLDN25C9JDP6 229 aa20.5■□□□□ 0.87
ALKAL1-201ENST00000358543 MT-ND2P03891 347 aa20.5■□□□□ 0.87
ALKAL1-201ENST00000358543 CD1AP06126 327 aa20.5■□□□□ 0.87
ALKAL1-201ENST00000358543 GPR6P46095 362 aaPredicted RBP20.5■□□□□ 0.87
ALKAL1-201ENST00000358543 SPHARQ15513 63 aa20.5■□□□□ 0.87
ALKAL1-201ENST00000358543 MOGAT3Q86VF5 341 aa20.5■□□□□ 0.87
ALKAL1-201ENST00000358543 HPSE2Q8WWQ2 592 aa20.5■□□□□ 0.87
ALKAL1-201ENST00000358543 PP6455Q8WZ26 134 aa20.5■□□□□ 0.87
ALKAL1-201ENST00000358543 RNF170Q96K19 258 aa20.5■□□□□ 0.87
ALKAL1-201ENST00000358543 TECTBQ96PL2 329 aa20.5■□□□□ 0.87
ALKAL1-201ENST00000358543 TMUB1Q9BVT8 246 aa20.5■□□□□ 0.87
ALKAL1-201ENST00000358543 FN3KRPQ9HA64 309 aa20.5■□□□□ 0.87
ALKAL1-201ENST00000358543 TREM2Q9NZC2 230 aa20.5■□□□□ 0.87
ALKAL1-201ENST00000358543 A0A096LNT2 108 aa20.49■□□□□ 0.87
ALKAL1-201ENST00000358543 OR5B21A6NL26 309 aa20.49■□□□□ 0.87
ALKAL1-201ENST00000358543 H3BSH0 61 aa20.49■□□□□ 0.87
ALKAL1-201ENST00000358543 PPIHO43447 177 aaKnown RBP20.49■□□□□ 0.87
ALKAL1-201ENST00000358543 PLPP2O43688 288 aa20.49■□□□□ 0.87
ALKAL1-201ENST00000358543 SERPINA3P01011 423 aa20.49■□□□□ 0.87
ALKAL1-201ENST00000358543 PMELP40967 661 aa20.49■□□□□ 0.87
ALKAL1-201ENST00000358543 MPPED2Q15777 294 aa20.49■□□□□ 0.87
ALKAL1-201ENST00000358543 PRAMEF6Q5VXH4 476 aa20.49■□□□□ 0.87
ALKAL1-201ENST00000358543 MOB3CQ70IA8 216 aa20.49■□□□□ 0.87
ALKAL1-201ENST00000358543 OR1M1Q8NGA1 313 aa20.49■□□□□ 0.87
ALKAL1-201ENST00000358543 OR51A4Q8NGJ6 313 aa20.49■□□□□ 0.87
ALKAL1-201ENST00000358543 OR10AC1Q8NH08 325 aa20.49■□□□□ 0.87
ALKAL1-201ENST00000358543 HPS1Q92902 700 aa20.49■□□□□ 0.87
ALKAL1-201ENST00000358543 CHST5Q9GZS9 411 aa20.49■□□□□ 0.87
ALKAL1-201ENST00000358543 CCDC90BQ9GZT6 254 aa20.49■□□□□ 0.87
ALKAL1-201ENST00000358543 TLNRD1Q9H1K6 362 aa20.49■□□□□ 0.87
ALKAL1-201ENST00000358543 ZNF281Q9Y2X9 895 aa20.49■□□□□ 0.87
ALKAL1-201ENST00000358543 FLNAP21333 2647 aaKnown RBP20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 ANKRD61A6NGH8 418 aa20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 A6NIN4 97 aa20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 LRRC30A6NM36 301 aa20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 RNF223E7ERA6 249 aa20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 TMEM178BH3BS89 294 aa20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 LMX1BO60663 402 aa20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 GRPP07492 148 aa20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 THBS2P35442 1172 aa20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 LOXL1Q08397 574 aaPredicted RBP20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 CEP78Q5JTW2 689 aa20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 PLCXD3Q63HM9 321 aa20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 PEG10Q86TG7 708 aaKnown RBP20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 WDR86Q86TI4 376 aa20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 OR13C3Q8NGS6 347 aa20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 OR11L1Q8NGX0 322 aa20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 ZNF420Q8TAQ5 688 aaPredicted RBP20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 GHSRQ92847 366 aa20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 RAB1CQ92928 201 aa20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 FGGYQ96C11 551 aa20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 TIMD4Q96H15 378 aa20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 OR5M11Q96RB7 305 aa20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 FGF23Q9GZV9 251 aaPredicted RBP20.48■□□□□ 0.87
ALKAL1-201ENST00000358543 IGHV3-64DA0A0J9YX35 117 aa20.47■□□□□ 0.87
ALKAL1-201ENST00000358543 GATBO75879 557 aaKnown RBP20.47■□□□□ 0.87
ALKAL1-201ENST00000358543 FOSL1P15407 271 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms