RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 NRASP01111 189 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 ZNF20P17024 532 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 GABRA5P31644 462 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 GNALP38405 381 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 CCL8P80075 99 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 OR8G1Q15617 311 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 UBE2V2Q15819 145 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 ACSM3Q53FZ2 586 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 SPRNQ5BIV9 151 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 CLVS2Q5SYC1 327 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 ASPHD2Q6ICH7 369 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 ZDHHC23Q8IYP9 409 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 PIGTQ969N2 578 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 ITPKCQ96DU7 683 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 SORCS2Q96PQ0 1159 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 SLC22A4Q9H015 551 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 FBXO9Q9UK97 447 aaPredicted RBP12.63□□□□□ -0.39
CCNE1-202ENST00000357943 ZDHHC8Q9ULC8 765 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 MPC1Q9Y5U8 109 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 USF3Q68DE3 2245 aa12.63□□□□□ -0.39
CCNE1-202ENST00000357943 IGHV3-64DA0A0J9YX35 117 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 ADH4P08319 380 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 FABP5Q01469 135 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 MAB21L1Q13394 359 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 FAM27D1Q5T7N8 215 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 TMEM91Q6ZNR0 172 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 CLVS1Q8IUQ0 354 aaPredicted RBP12.62□□□□□ -0.39
CCNE1-202ENST00000357943 SERPINA12Q8IW75 414 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 PARP16Q8N5Y8 322 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 HPSE2Q8WWQ2 592 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 PP6455Q8WZ26 134 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 DERL3Q96Q80 235 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 CHST5Q9GZS9 411 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 FGF23Q9GZV9 251 aaPredicted RBP12.62□□□□□ -0.39
CCNE1-202ENST00000357943 CCDC160A6NGH7 325 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 PIN1P1O15428 100 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 NCR1O76036 304 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 LY6HO94772 140 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 CD2P06729 351 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 TGFBR2P37173 567 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 PLCXD3Q63HM9 321 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 MOB3CQ70IA8 216 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 OR13C9Q8NGT0 318 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 OR8S1Q8NH09 359 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 TRMT61AQ96FX7 289 aaKnown RBP12.62□□□□□ -0.39
CCNE1-202ENST00000357943 OR2V2Q96R30 315 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 RAB1BQ9H0U4 201 aa12.62□□□□□ -0.39
CCNE1-202ENST00000357943 PPIL3Q9H2H8 161 aaKnown RBP12.62□□□□□ -0.39
CCNE1-202ENST00000357943 TRBV5-7A0A0A0MS05 114 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 IGKV1-9A0A0C4DH69 117 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 LOC100289279A0A1B0GTE1 492 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 ANXA2P2A6NMY6 339 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 SERPINA3P01011 423 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 HPXP02790 462 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 CD36P16671 472 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 PSMA1P25786 263 aaKnown RBP12.61□□□□□ -0.39
CCNE1-202ENST00000357943 THBS2P35442 1172 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 TNFAIP6P98066 277 aaPredicted RBP12.61□□□□□ -0.39
CCNE1-202ENST00000357943 HNRNPA0Q13151 305 aaKnown RBP12.61□□□□□ -0.39
CCNE1-202ENST00000357943 TRAM1Q15629 374 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 CEACAM21Q3KPI0 293 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 FAM209AQ5JX71 171 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 GPR107Q5VW38 600 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 UNQ9370/PRO34162Q6UXP9 181 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 CEACAM19Q7Z692 300 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 NPRL2Q8WTW4 380 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 ZFAND2BQ8WV99 257 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 ITLN1Q8WWA0 313 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 OR5P3Q8WZ94 311 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 DIRC2Q96SL1 478 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 NOX4Q9NPH5 578 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 DECR2Q9NUI1 292 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 NKIRAS2Q9NYR9 191 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 TAS2R4Q9NYW5 299 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 RSL24D1Q9UHA3 163 aaKnown RBP12.61□□□□□ -0.39
CCNE1-202ENST00000357943 IL19Q9UHD0 177 aa12.61□□□□□ -0.39
CCNE1-202ENST00000357943 NOP16Q9Y3C1 178 aaKnown RBP12.61□□□□□ -0.39
CCNE1-202ENST00000357943 PDZD2O15018 2839 aa12.6□□□□□ -0.39
CCNE1-202ENST00000357943 ZNF701M0R085 212 aaPredicted RBP12.6□□□□□ -0.39
CCNE1-202ENST00000357943 GABRPO00591 440 aa12.6□□□□□ -0.39
CCNE1-202ENST00000357943 TPD52L2O43399 206 aaKnown RBP12.6□□□□□ -0.39
CCNE1-202ENST00000357943 GATBO75879 557 aaKnown RBP12.6□□□□□ -0.39
CCNE1-202ENST00000357943 RGS9O75916 674 aaPredicted RBP12.6□□□□□ -0.39
CCNE1-202ENST00000357943 CD55P08174 381 aa12.6□□□□□ -0.39
CCNE1-202ENST00000357943 TNFSF4P23510 183 aa12.6□□□□□ -0.39
CCNE1-202ENST00000357943 DNASE1P24855 282 aa12.6□□□□□ -0.39
CCNE1-202ENST00000357943 RBMXP38159 391 aaKnown RBP12.6□□□□□ -0.39
CCNE1-202ENST00000357943 CRYBB2P43320 205 aa12.6□□□□□ -0.39
CCNE1-202ENST00000357943 GPM6AP51674 278 aa12.6□□□□□ -0.39
CCNE1-202ENST00000357943 CNPY1Q3B7I2 92 aa12.6□□□□□ -0.39
CCNE1-202ENST00000357943 PCGF3Q3KNV8 242 aa12.6□□□□□ -0.39
CCNE1-202ENST00000357943 CD200R1LQ6Q8B3 271 aa12.6□□□□□ -0.39
CCNE1-202ENST00000357943 UTS2BQ765I0 119 aa12.6□□□□□ -0.39
CCNE1-202ENST00000357943 WDR86Q86TI4 376 aa12.6□□□□□ -0.39
CCNE1-202ENST00000357943 OR51A2Q8NGJ7 313 aa12.6□□□□□ -0.39
CCNE1-202ENST00000357943 OR5D14Q8NGL3 314 aa12.6□□□□□ -0.39
CCNE1-202ENST00000357943 ZNF420Q8TAQ5 688 aaPredicted RBP12.6□□□□□ -0.39
CCNE1-202ENST00000357943 YIPF6Q96EC8 236 aa12.6□□□□□ -0.39
CCNE1-202ENST00000357943 MEGF10Q96KG7 1140 aa12.6□□□□□ -0.39
CCNE1-202ENST00000357943 HIST1H2AAQ96QV6 131 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms