RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 TRAF3IP2O43734 574 aaPredicted RBP10.55□□□□□ -0.72
COL9A1-202ENST00000357250 CNIH1O95406 144 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 EMP3P54852 163 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 ELLP55199 621 aaPredicted RBP10.55□□□□□ -0.72
COL9A1-202ENST00000357250 ISXQ2M1V0 245 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 CDONQ4KMG0 1287 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 SLC25A30Q5SVS4 291 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 ZNF425Q6IV72 752 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 C11orf87Q6NUJ2 197 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.55□□□□□ -0.72
COL9A1-202ENST00000357250 FAM234AQ9H0X4 552 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 RAB18Q9NP72 206 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 OCIAD1Q9NX40 245 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 WNT16Q9UBV4 365 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 TNS1Q9HBL0 1735 aaKnown RBP10.55□□□□□ -0.72
COL9A1-202ENST00000357250 ALPK2Q86TB3 2170 aa10.55□□□□□ -0.72
COL9A1-202ENST00000357250 HOXD11P31277 338 aaPredicted RBP10.54□□□□□ -0.72
COL9A1-202ENST00000357250 HAAOP46952 286 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 CLPPQ16740 277 aaPredicted RBP10.54□□□□□ -0.72
COL9A1-202ENST00000357250 PHYHD1Q5SRE7 291 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 GABRG3Q99928 467 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 COMMD5Q9GZQ3 224 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 ZNF355PQ9NSJ1 428 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 KLK11Q9UBX7 282 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 RPH3ALQ9UNE2 315 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 OR10J4P0C629 311 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 MGST1P10620 155 aaKnown RBP10.54□□□□□ -0.72
COL9A1-202ENST00000357250 GNG3P63215 75 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 INSM1Q01101 510 aaPredicted RBP10.54□□□□□ -0.72
COL9A1-202ENST00000357250 CEACAM16Q2WEN9 425 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 PLA1AQ53H76 456 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 LINC01555Q8NAE3 123 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 OR4S1Q8NGB4 309 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 DEFB127Q9H1M4 99 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 TMEM9BQ9NQ34 198 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 SIRPB1O00241 398 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 RPS27P42677 84 aaKnown RBP10.54□□□□□ -0.72
COL9A1-202ENST00000357250 KCNJ3P48549 501 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 ZNF117Q03924 483 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 TRAT1Q6PIZ9 186 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 TSEN54Q7Z6J9 526 aaKnown RBP10.54□□□□□ -0.72
COL9A1-202ENST00000357250 PIK3IP1Q96FE7 263 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 A0A0B4J203 849 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 MKRN2OSH3BPM6 223 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 SSSCA1O60232 199 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 NME2P1O60361 137 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 EPPINO95925 133 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 MYBPHQ13203 477 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 TEX261Q6UWH6 196 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 OR5AP2Q8NGF4 316 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 OR5M8Q8NGP6 311 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 OR1J1Q8NGS3 322 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 GALMQ96C23 342 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 WDR89Q96FK6 387 aaPredicted RBP10.54□□□□□ -0.72
COL9A1-202ENST00000357250 CRISPLD2Q9H0B8 497 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 PSENENQ9NZ42 101 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 KIAA1456Q9P272 454 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 U3KQ87 197 aa10.54□□□□□ -0.72
COL9A1-202ENST00000357250 CRYABP02511 175 aaKnown RBP10.53□□□□□ -0.72
COL9A1-202ENST00000357250 RRASP10301 218 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 UBE2IP63279 158 aaKnown RBP10.53□□□□□ -0.72
COL9A1-202ENST00000357250 ZNF787Q6DD87 383 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 JMJD6Q6NYC1 403 aaPredicted RBP10.53□□□□□ -0.72
COL9A1-202ENST00000357250 FBXW5Q969U6 566 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 PHYHIPLQ96FC7 376 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 SPACA5Q96QH8 159 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 ADGRL4Q9HBW9 690 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 NDRG3Q9UGV2 375 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 OSGIN2Q9Y236 505 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 A0A1W2PQD3 144 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 TNFSF11O14788 317 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 CTSVO60911 334 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 B4GALT1P15291 398 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 WDR38Q5JTN6 314 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 ZNF561Q8N587 486 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 BPIFCQ8NFQ6 507 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 ANGPTL6Q8NI99 470 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 MRPS24Q96EL2 167 aaKnown RBP10.53□□□□□ -0.72
COL9A1-202ENST00000357250 VN1R1Q9GZP7 353 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 PPP1R3CQ9UQK1 317 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 TRAV17A0A0B4J275 112 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 TMEM30CPA0ZSE6 113 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 PYCARD-AS1I3L0S3 204 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 CTDSPLO15194 276 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 HRO43593 1189 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 DHRS3O75911 302 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 CST4P01036 141 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 HES1Q14469 280 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 FAHD2BQ6P2I3 314 aaPredicted RBP10.53□□□□□ -0.72
COL9A1-202ENST00000357250 DBX2Q6ZNG2 339 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 OR4C3Q8NH37 302 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 FAHD2AQ96GK7 314 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 TRIB1Q96RU8 372 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 NEURL2Q9BR09 285 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 MARVELD1Q9BSK0 173 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 XKRY2A2RUG3 117 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 ZFPL1O95159 310 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 HIST1H1DP16402 221 aaKnown RBP10.53□□□□□ -0.72
COL9A1-202ENST00000357250 PCMT1P22061 227 aa10.53□□□□□ -0.72
COL9A1-202ENST00000357250 IGFBP7Q16270 282 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms