RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 ALOX12BO75342 701 aa12.6□□□□□ -0.39
SREBF1-202ENST00000355815 ACAA2P42765 397 aaKnown RBP12.6□□□□□ -0.39
SREBF1-202ENST00000355815 ZNF117Q03924 483 aa12.6□□□□□ -0.39
SREBF1-202ENST00000355815 ZNF266Q14584 549 aa12.6□□□□□ -0.39
SREBF1-202ENST00000355815 NKAIN1Q4KMZ8 207 aa12.6□□□□□ -0.39
SREBF1-202ENST00000355815 KCNIP4Q6PIL6 250 aa12.6□□□□□ -0.39
SREBF1-202ENST00000355815 ASB17Q8WXJ9 295 aa12.6□□□□□ -0.39
SREBF1-202ENST00000355815 ZC3HAV1LQ96H79 300 aaKnown RBP12.6□□□□□ -0.39
SREBF1-202ENST00000355815 VSTM2LQ96N03 204 aa12.6□□□□□ -0.39
SREBF1-202ENST00000355815 CLEC1BQ9P126 229 aa12.6□□□□□ -0.39
SREBF1-202ENST00000355815 TK1P04183 234 aa12.6□□□□□ -0.39
SREBF1-202ENST00000355815 NPBWR1P48145 328 aa12.6□□□□□ -0.39
SREBF1-202ENST00000355815 MALLQ13021 153 aa12.6□□□□□ -0.39
SREBF1-202ENST00000355815 TRIM61Q5EBN2 209 aa12.6□□□□□ -0.39
SREBF1-202ENST00000355815 SYS1Q8N2H4 156 aa12.6□□□□□ -0.39
SREBF1-202ENST00000355815 OR51E1Q8TCB6 317 aa12.6□□□□□ -0.39
SREBF1-202ENST00000355815 PNPLA2Q96AD5 504 aa12.6□□□□□ -0.39
SREBF1-202ENST00000355815 LRFN5Q96NI6 719 aa12.6□□□□□ -0.39
SREBF1-202ENST00000355815 C1orf198Q9H425 327 aa12.6□□□□□ -0.39
SREBF1-202ENST00000355815 MSL2Q9HCI7 577 aa12.6□□□□□ -0.39
SREBF1-202ENST00000355815 SF3B6Q9Y3B4 125 aaKnown RBP12.6□□□□□ -0.39
SREBF1-202ENST00000355815 C7orf77A4D0Y5 90 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 A6NIZ1 184 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 IGHV3-9P01782 118 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 CD96P40200 585 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 RAP1BP61224 184 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 LTC4SQ16873 150 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 PLAC9Q5JTB6 97 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 GGNBP1Q5YKI7 109 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 C5orf46Q6UWT4 87 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 ZNF66Q6ZN08 573 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 LGI3Q8N145 548 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 ZFP64Q9NPA5 681 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 V9GYS6 101 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 KIF26BQ2KJY2 2108 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 A8MVM7 634 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 GPR137BO60478 399 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 CLDN1O95832 211 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 HBE1P02100 147 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 IGHV4-34P06331 123 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 HOXD4P09016 255 aaPredicted RBP12.59□□□□□ -0.39
SREBF1-202ENST00000355815 POLR2HP52434 150 aaKnown RBP12.59□□□□□ -0.39
SREBF1-202ENST00000355815 RPL27P61353 136 aaKnown RBP12.59□□□□□ -0.39
SREBF1-202ENST00000355815 H3F3AP84243 136 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 TAF9Q16594 264 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 OPN5Q6U736 354 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 OR5L2Q8NGL0 311 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 OR8U1Q8NH10 309 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 DDIT4LQ96D03 193 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 CACNA1HO95180 2353 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 TRAV1-2A0A0B4J238 106 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 C7orf66A4D0T2 115 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 H0YIG0 161 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 DVL1O14640 695 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 GPR37O15354 613 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 CDAP32320 146 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 RAG2P55895 527 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 TGIF1Q15583 401 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 VAMP3Q15836 100 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 A0A087WV48 116 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 APOA2P02652 100 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 ZNF25P17030 456 aaPredicted RBP12.59□□□□□ -0.39
SREBF1-202ENST00000355815 NKX2-1P43699 371 aaPredicted RBP12.59□□□□□ -0.39
SREBF1-202ENST00000355815 PPIAP62937 165 aaKnown RBP12.59□□□□□ -0.39
SREBF1-202ENST00000355815 NPEPL1Q8NDH3 523 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 OR1L3Q8NH93 324 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 CCDC74AQ96AQ1 378 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 ZNF845Q96IR2 970 aaPredicted RBP12.59□□□□□ -0.39
SREBF1-202ENST00000355815 DCAF16Q9NXF7 216 aa12.59□□□□□ -0.39
SREBF1-202ENST00000355815 IGHV3-15A0A0B4J1V0 119 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 IGHV3-64DA0A0J9YX35 117 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 SLC37A1P57057 533 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 NANOS3P60323 173 aaKnown RBP12.58□□□□□ -0.4
SREBF1-202ENST00000355815 LAMTOR1Q6IAA8 161 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 SPICQ8N5J4 248 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 ABHD6Q9BV23 337 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 ESPL1Q14674 2120 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 FNDC1Q4ZHG4 1894 aaPredicted RBP12.58□□□□□ -0.4
SREBF1-202ENST00000355815 LINC00587B1AMM8 73 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 ABCD4O14678 606 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 TP53I11O14683 189 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 SSSCA1O60232 199 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 SMIM6P0DI80 62 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 PTCRAQ6ISU1 281 aaPredicted RBP12.58□□□□□ -0.4
SREBF1-202ENST00000355815 UQCC3Q6UW78 93 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 RBMS3Q6XE24 437 aaKnown RBP12.58□□□□□ -0.4
SREBF1-202ENST00000355815 PPP1R3BQ86XI6 285 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 THNSL2Q86YJ6 484 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 SNX22Q96L94 193 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 TLNRD1Q9H1K6 362 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 C19orf25Q9UFG5 118 aaPredicted RBP12.58□□□□□ -0.4
SREBF1-202ENST00000355815 FLVCR1Q9Y5Y0 555 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 SPTAN1Q13813 2472 aaKnown RBP12.58□□□□□ -0.4
SREBF1-202ENST00000355815 A0A1B0GX78 115 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 A0A1W2PNV4 684 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 HSBP1L1C9JCN9 74 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 CLDN17P56750 224 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 TAS2R30P59541 319 aa12.58□□□□□ -0.4
SREBF1-202ENST00000355815 DMKNQ6E0U4 476 aaPredicted RBP12.58□□□□□ -0.4
SREBF1-202ENST00000355815 ZNRF4Q8WWF5 429 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms