RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 SDC2P34741 201 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 PPP5CP53041 499 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 NANOS3P60323 173 aaKnown RBP6.01□□□□□ -1.45
VPS13A-201ENST00000355766 SLC3A1Q07837 685 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 CAMK2DQ13557 499 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 RAB35Q15286 201 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 ETFDHQ16134 617 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 HSD17B12Q53GQ0 312 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 TMEM244Q5VVB8 128 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 OR2A2Q6IF42 318 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 KLHL24Q6TFL4 600 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 BAIAP2L2Q6UXY1 529 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 Q6ZRM9 215 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 AAED1Q7RTV5 226 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 DCXRQ7Z4W1 244 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 CEACAM19Q7Z692 300 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 CCDC190Q86UF4 302 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 CATSPERDQ86XM0 798 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 CCDC36Q8IYA8 594 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 KDM8Q8N371 416 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 NKAIN3Q8N8D7 197 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 THEM6Q8WUY1 208 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 TMEM203Q969S6 136 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 NABP1Q96AH0 204 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 APH1AQ96BI3 265 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 SLAMF6Q96DU3 332 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 GMPPAQ96IJ6 420 aaPredicted RBP6.01□□□□□ -1.45
VPS13A-201ENST00000355766 BOD1Q96IK1 185 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 ZNF385AQ96PM9 386 aaKnown RBP6.01□□□□□ -1.45
VPS13A-201ENST00000355766 DERL3Q96Q80 235 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 SLC30A2Q9BRI3 323 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 EMC6Q9BV81 110 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 C6orf62Q9GZU0 229 aaPredicted RBP6.01□□□□□ -1.45
VPS13A-201ENST00000355766 SLCO5A1Q9H2Y9 848 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 RGCCQ9H4X1 137 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 CALHM2Q9HA72 323 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 MOV10Q9HCE1 1003 aaKnown RBP6.01□□□□□ -1.45
VPS13A-201ENST00000355766 TMEM38BQ9NVV0 291 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 SLCO1C1Q9NYB5 712 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 ABRACLQ9P1F3 81 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 CKLFQ9UBR5 152 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 HHLA2Q9UM44 414 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 FOXJ3Q9UPW0 622 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 LRP12Q9Y561 859 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 LHFPL6Q9Y693 200 aa6.01□□□□□ -1.45
VPS13A-201ENST00000355766 IGKV1D-43A0A0B4J1Z2 117 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 A0A0U1RQV5 110 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 A0A1W2PPL8 197 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 LOC390937A0A1W2PQ73 354 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 SLC22A20A6NK97 555 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 A8MXE2 369 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 ZNF587BE7ETH6 402 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 AIPO00170 330 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 SS18L1O75177 396 aaPredicted RBP6□□□□□ -1.45
VPS13A-201ENST00000355766 FARS2O95363 451 aaKnown RBP6□□□□□ -1.45
VPS13A-201ENST00000355766 CRHP06850 196 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 H2BFMP0C1H6 154 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 OCM2P0CE71 109 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 COX5BP10606 129 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 CD37P11049 281 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 RAB3BP20337 219 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 TCEA1P23193 301 aaKnown RBP6□□□□□ -1.45
VPS13A-201ENST00000355766 HNRNPA0Q13151 305 aaKnown RBP6□□□□□ -1.45
VPS13A-201ENST00000355766 KRTAP15-1Q3LI76 137 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 KRTAP27-1Q3LI81 207 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 WDR38Q5JTN6 314 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 BCL2L15Q5TBC7 163 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 SFXN4Q6P4A7 337 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 Q6ZSR3 168 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 LRRC28Q86X40 367 aaPredicted RBP6□□□□□ -1.45
VPS13A-201ENST00000355766 HIST2H2ABQ8IUE6 130 aaPredicted RBP6□□□□□ -1.45
VPS13A-201ENST00000355766 CDH26Q8IXH8 852 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 UBQLNLQ8IYU4 475 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 ELMOD2Q8IZ81 293 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 ZNF676Q8N7Q3 588 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 ZFP41Q8N8Y5 198 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 IL17RDQ8NFM7 739 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 OR52H1Q8NGJ2 320 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 ABHD3Q8WU67 409 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 C15orf40Q8WUR7 153 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 WDYHV1Q96HA8 205 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 CEP19Q96LK0 163 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 WFIKKN1Q96NZ8 548 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 GPHA2Q96T91 129 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 SH3GL3Q99963 347 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 BARHL1Q9BZE3 327 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 RERGLQ9H628 205 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 PNRC2Q9NPJ4 139 aaKnown RBP6□□□□□ -1.45
VPS13A-201ENST00000355766 TMEM160Q9NX00 188 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 FAM206AQ9NX38 181 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 CLCF1Q9UBD9 225 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 LPAR3Q9UBY5 353 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 FBXL3Q9UKT7 428 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 NOSIPQ9Y314 301 aaKnown RBP6□□□□□ -1.45
VPS13A-201ENST00000355766 CMAHPQ9Y471 501 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 ETV7Q9Y603 341 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 ARHGAP21Q5T5U3 1957 aa6□□□□□ -1.45
VPS13A-201ENST00000355766 ARID1AO14497 2285 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 TMEM269A0A1B0GVZ9 245 aa5.99□□□□□ -1.45
VPS13A-201ENST00000355766 OR6C6A6NF89 314 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms