RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 HNRNPKP61978 463 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMG6-202ENST00000354901 VHLLQ6RSH7 139 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 CDC20BQ86Y33 519 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 LRRC75AQ8NAA5 344 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 TUBA4BQ9H853 241 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 PDE7BQ9NP56 450 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 CGGBP1Q9UFW8 167 aaPredicted RBP8.34□□□□□ -1.07
SMG6-202ENST00000354901 VSIG4Q9Y279 399 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 ZNF749O43361 778 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 ABHD16AO95870 558 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 PNPP00491 289 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 CLPSP04118 112 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 FAM157CP0CG43 387 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 KLK2P20151 261 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 SERPINA2P20848 420 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 KIR3DL2P43630 455 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 BLKP51451 505 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 RPS23P62266 143 aaKnown RBP8.34□□□□□ -1.07
SMG6-202ENST00000354901 FOXO1Q12778 655 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 NSDHLQ15738 373 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 AARDQ4LEZ3 155 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 RNASE10Q5GAN6 216 aaKnown RBP8.34□□□□□ -1.07
SMG6-202ENST00000354901 ZNF679Q8IYX0 411 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 EID2Q8N6I1 236 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 GVQW1Q8N7I0 195 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 GPR119Q8TDV5 335 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 FAM46BQ96A09 425 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 MESP1Q9BRJ9 268 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 EGLN1Q9GZT9 426 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 HIST1H2BKO60814 126 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 IFNA6P05013 189 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 HIST1H2BJP06899 126 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 HIST1H2BOP23527 126 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 HIST1H2BBP33778 126 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 HIST1H2BDP58876 126 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 HIST1H2BCP62807 126 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 RHEBQ15382 184 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 ACKR1Q16570 336 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 HIST2H2BEQ16778 126 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.33□□□□□ -1.08
SMG6-202ENST00000354901 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.33□□□□□ -1.08
SMG6-202ENST00000354901 THEM4Q5T1C6 240 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 P4HA3Q7Z4N8 544 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 ZNF440Q8IYI8 595 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 ZNF664Q8N3J9 261 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 EXD3Q8N9H8 876 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 OR1J1Q8NGS3 322 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 HIST1H2BHQ93079 126 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 MVB12AQ96EY5 273 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 CMKLR1Q99788 373 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 HIST1H2BNQ99877 126 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 HIST1H2BMQ99879 126 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 NUDT9Q9BW91 350 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 SNHG12Q9BXW3 62 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 TWSG1Q9GZX9 223 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 SDK2Q58EX2 2172 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 SOX1O00570 391 aaPredicted RBP8.33□□□□□ -1.08
SMG6-202ENST00000354901 CTAG2O75638 210 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 CRHP06850 196 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 CXCL1P09341 107 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 SLC25A4P12235 298 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 EIF1AXP47813 144 aaKnown RBP8.33□□□□□ -1.08
SMG6-202ENST00000354901 TAS2R19P59542 299 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 GABREP78334 506 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 PLCXD2Q0VAA5 305 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 NKAIN1Q4KMZ8 207 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 SOHLH1Q5JUK2 328 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 SAPCD1Q5SSQ6 148 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 ZNF584Q8IVC4 421 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 LINC00346Q8IVM7 164 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 CMBLQ96DG6 245 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 C5orf34Q96MH7 638 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 CUTCQ9NTM9 273 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 B9D1Q9UPM9 204 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 H0YIZ8 118 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 TGOLN2O43493 480 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 TMEM127O75204 238 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 CD8AP01732 235 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 OPN1LWP04000 364 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 CALCBP10092 127 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 CTLA4P16410 223 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 SLC25A1P53007 311 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 UBE2KP61086 200 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 IGLV3-21P80748 117 aaPredicted RBP8.33□□□□□ -1.08
SMG6-202ENST00000354901 MFGE8Q08431 387 aaPredicted RBP8.33□□□□□ -1.08
SMG6-202ENST00000354901 SPOCK1Q08629 439 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 C2orf76Q3KRA6 126 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 BIVMQ86UB2 503 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 SUMF2Q8NBJ7 301 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 SLC30A7Q8NEW0 376 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 ZNF417Q8TAU3 575 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 NTNG2Q96CW9 530 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 C4orf45Q96LM5 186 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 GPX7Q96SL4 187 aaPredicted RBP8.33□□□□□ -1.08
SMG6-202ENST00000354901 TMEM208Q9BTX3 173 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 HS3ST3B1Q9Y662 390 aa8.33□□□□□ -1.08
SMG6-202ENST00000354901 VPS13AQ96RL7 3174 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 A0A1W2PPC4 97 aa8.32□□□□□ -1.08
SMG6-202ENST00000354901 ADAM10O14672 748 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms