RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 ZNF529Q6P280 563 aa20.63■□□□□ 0.89
HMGA2-201ENST00000354636 PAMR1Q6UXH9 720 aa20.63■□□□□ 0.89
HMGA2-201ENST00000354636 ZDHHC23Q8IYP9 409 aa20.63■□□□□ 0.89
HMGA2-201ENST00000354636 ZCCHC24Q8N2G6 241 aaKnown RBP20.63■□□□□ 0.89
HMGA2-201ENST00000354636 ITPKCQ96DU7 683 aa20.63■□□□□ 0.89
HMGA2-201ENST00000354636 CCL19Q99731 98 aa20.63■□□□□ 0.89
HMGA2-201ENST00000354636 ADAT1Q9BUB4 502 aaKnown RBP20.63■□□□□ 0.89
HMGA2-201ENST00000354636 LIME1Q9H400 295 aa20.63■□□□□ 0.89
HMGA2-201ENST00000354636 GPR173Q9NS66 373 aa20.63■□□□□ 0.89
HMGA2-201ENST00000354636 SSR3Q9UNL2 185 aa20.63■□□□□ 0.89
HMGA2-201ENST00000354636 NOP16Q9Y3C1 178 aaKnown RBP20.63■□□□□ 0.89
HMGA2-201ENST00000354636 PMF1-BGLAPU3KQ54 211 aa20.63■□□□□ 0.89
HMGA2-201ENST00000354636 DSCAMO60469 2012 aa20.62■□□□□ 0.89
HMGA2-201ENST00000354636 SPRY3O43610 288 aa20.62■□□□□ 0.89
HMGA2-201ENST00000354636 IGHV1-46P01743 117 aa20.62■□□□□ 0.89
HMGA2-201ENST00000354636 IGFBP3P17936 291 aaPredicted RBP20.62■□□□□ 0.89
HMGA2-201ENST00000354636 BLMHQ13867 455 aa20.62■□□□□ 0.89
HMGA2-201ENST00000354636 OR8G1Q15617 311 aa20.62■□□□□ 0.89
HMGA2-201ENST00000354636 TIMM50Q3ZCQ8 353 aa20.62■□□□□ 0.89
HMGA2-201ENST00000354636 DMRTC1Q5HYR2 192 aa20.62■□□□□ 0.89
HMGA2-201ENST00000354636 CEP78Q5JTW2 689 aa20.62■□□□□ 0.89
HMGA2-201ENST00000354636 MOB3CQ70IA8 216 aa20.62■□□□□ 0.89
HMGA2-201ENST00000354636 SATL1Q86VE3 508 aa20.62■□□□□ 0.89
HMGA2-201ENST00000354636 OR2Z1Q8NG97 314 aa20.62■□□□□ 0.89
HMGA2-201ENST00000354636 OR10AD1Q8NGE0 317 aa20.62■□□□□ 0.89
HMGA2-201ENST00000354636 HPSE2Q8WWQ2 592 aa20.62■□□□□ 0.89
HMGA2-201ENST00000354636 DVL3Q92997 716 aaPredicted RBP20.62■□□□□ 0.89
HMGA2-201ENST00000354636 ABCB9Q9NP78 766 aa20.62■□□□□ 0.89
HMGA2-201ENST00000354636 TXNL4BQ9NX01 149 aaKnown RBP20.62■□□□□ 0.89
HMGA2-201ENST00000354636 TAS2R4Q9NYW5 299 aa20.62■□□□□ 0.89
HMGA2-201ENST00000354636 IGKV1-9A0A0C4DH69 117 aa20.61■□□□□ 0.89
HMGA2-201ENST00000354636 ANXA2P2A6NMY6 339 aa20.61■□□□□ 0.89
HMGA2-201ENST00000354636 ALX3O95076 343 aa20.61■□□□□ 0.89
HMGA2-201ENST00000354636 FSTP19883 344 aa20.61■□□□□ 0.89
HMGA2-201ENST00000354636 CEACAM21Q3KPI0 293 aa20.61■□□□□ 0.89
HMGA2-201ENST00000354636 PLCXD3Q63HM9 321 aa20.61■□□□□ 0.89
HMGA2-201ENST00000354636 OR13C9Q8NGT0 318 aa20.61■□□□□ 0.89
HMGA2-201ENST00000354636 OR5P3Q8WZ94 311 aa20.61■□□□□ 0.89
HMGA2-201ENST00000354636 RPL3LQ92901 407 aaKnown RBP20.61■□□□□ 0.89
HMGA2-201ENST00000354636 TECTBQ96PL2 329 aa20.61■□□□□ 0.89
HMGA2-201ENST00000354636 DIRC2Q96SL1 478 aa20.61■□□□□ 0.89
HMGA2-201ENST00000354636 VRK1Q99986 396 aaPredicted RBP20.61■□□□□ 0.89
HMGA2-201ENST00000354636 CHCHD6Q9BRQ6 235 aa20.61■□□□□ 0.89
HMGA2-201ENST00000354636 CACNG6Q9BXT2 260 aa20.61■□□□□ 0.89
HMGA2-201ENST00000354636 EXOSC4Q9NPD3 245 aaKnown RBP20.61■□□□□ 0.89
HMGA2-201ENST00000354636 FOXJ3Q9UPW0 622 aa20.61■□□□□ 0.89
HMGA2-201ENST00000354636 TACC2O95359 2948 aa20.61■□□□□ 0.89
HMGA2-201ENST00000354636 TRAV8-7A0A075B6U6 113 aa20.6■□□□□ 0.89
HMGA2-201ENST00000354636 ARL6IP5O75915 188 aa20.6■□□□□ 0.89
HMGA2-201ENST00000354636 ATF1P18846 271 aa20.6■□□□□ 0.89
HMGA2-201ENST00000354636 HSD17B12Q53GQ0 312 aa20.6■□□□□ 0.89
HMGA2-201ENST00000354636 C22orf42Q6IC83 251 aa20.6■□□□□ 0.89
HMGA2-201ENST00000354636 GDPGP1Q6ZNW5 385 aa20.6■□□□□ 0.89
HMGA2-201ENST00000354636 ANKRD13BQ86YJ7 626 aa20.6■□□□□ 0.89
HMGA2-201ENST00000354636 SPERTQ8NA61 448 aa20.6■□□□□ 0.89
HMGA2-201ENST00000354636 OR8S1Q8NH09 359 aa20.6■□□□□ 0.89
HMGA2-201ENST00000354636 ELMOD3Q96FG2 381 aa20.6■□□□□ 0.89
HMGA2-201ENST00000354636 FGF23Q9GZV9 251 aaPredicted RBP20.6■□□□□ 0.89
HMGA2-201ENST00000354636 OVOL3O00110 214 aa20.59■□□□□ 0.89
HMGA2-201ENST00000354636 SULT1B1O43704 296 aa20.59■□□□□ 0.89
HMGA2-201ENST00000354636 AIREO43918 545 aa20.59■□□□□ 0.89
HMGA2-201ENST00000354636 GPR107Q5VW38 600 aa20.59■□□□□ 0.89
HMGA2-201ENST00000354636 OR5A2Q8NGI9 324 aa20.59■□□□□ 0.89
HMGA2-201ENST00000354636 OR51A2Q8NGJ7 313 aa20.59■□□□□ 0.89
HMGA2-201ENST00000354636 HIST1H2AAQ96QV6 131 aa20.59■□□□□ 0.89
HMGA2-201ENST00000354636 TPK1Q9H3S4 243 aa20.59■□□□□ 0.89
HMGA2-201ENST00000354636 NKIRAS2Q9NYR9 191 aa20.59■□□□□ 0.89
HMGA2-201ENST00000354636 CKLFQ9UBR5 152 aa20.59■□□□□ 0.89
HMGA2-201ENST00000354636 EDARQ9UNE0 448 aa20.59■□□□□ 0.89
HMGA2-201ENST00000354636 BAHCC1Q9P281 2608 aa20.59■□□□□ 0.89
HMGA2-201ENST00000354636 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.58■□□□□ 0.89
HMGA2-201ENST00000354636 F5H5P2 479 aa20.58■□□□□ 0.89
HMGA2-201ENST00000354636 H7C417 338 aa20.58■□□□□ 0.89
HMGA2-201ENST00000354636 CD55P08174 381 aa20.58■□□□□ 0.89
HMGA2-201ENST00000354636 SRMP19623 302 aa20.58■□□□□ 0.89
HMGA2-201ENST00000354636 RAB3AP20336 220 aa20.58■□□□□ 0.89
HMGA2-201ENST00000354636 CALRP27797 417 aaKnown RBP20.58■□□□□ 0.89
HMGA2-201ENST00000354636 MAB21L1Q13394 359 aa20.58■□□□□ 0.89
HMGA2-201ENST00000354636 CNN3Q15417 329 aaKnown RBP20.58■□□□□ 0.89
HMGA2-201ENST00000354636 FAM209AQ5JX71 171 aa20.58■□□□□ 0.89
HMGA2-201ENST00000354636 OR1M1Q8NGA1 313 aa20.58■□□□□ 0.89
HMGA2-201ENST00000354636 MICU1Q9BPX6 476 aa20.58■□□□□ 0.89
HMGA2-201ENST00000354636 CENPOQ9BU64 300 aa20.58■□□□□ 0.89
HMGA2-201ENST00000354636 IL19Q9UHD0 177 aa20.58■□□□□ 0.89
HMGA2-201ENST00000354636 GSTK1Q9Y2Q3 226 aa20.58■□□□□ 0.89
HMGA2-201ENST00000354636 LOC100506127A0A0U1RQW1 187 aa20.58■□□□□ 0.88
HMGA2-201ENST00000354636 LOC100289279A0A1B0GTE1 492 aa20.58■□□□□ 0.88
HMGA2-201ENST00000354636 CDKN1AP38936 164 aa20.58■□□□□ 0.88
HMGA2-201ENST00000354636 PPP3R1P63098 170 aa20.58■□□□□ 0.88
HMGA2-201ENST00000354636 PCGF3Q3KNV8 242 aa20.58■□□□□ 0.88
HMGA2-201ENST00000354636 SLC16A12Q6ZSM3 486 aa20.58■□□□□ 0.88
HMGA2-201ENST00000354636 SPSB1Q96BD6 273 aa20.58■□□□□ 0.88
HMGA2-201ENST00000354636 RNF170Q96K19 258 aa20.58■□□□□ 0.88
HMGA2-201ENST00000354636 NAA50Q9GZZ1 169 aaKnown RBP20.58■□□□□ 0.88
HMGA2-201ENST00000354636 CXXC4Q9H2H0 198 aa20.58■□□□□ 0.88
HMGA2-201ENST00000354636 TCF7L1Q9HCS4 588 aa20.58■□□□□ 0.88
HMGA2-201ENST00000354636 SLC7A11Q9UPY5 501 aa20.58■□□□□ 0.88
HMGA2-201ENST00000354636 PLEKHA6Q9Y2H5 1048 aa20.58■□□□□ 0.88
HMGA2-201ENST00000354636 TPD52L2O43399 206 aaKnown RBP20.57■□□□□ 0.88
HMGA2-201ENST00000354636 TNFSF4P23510 183 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms