RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 RNF133Q8WVZ7 376 aa13.04□□□□□ -0.32
PDGFA-201ENST00000354513 REEP6Q96HR9 211 aa13.04□□□□□ -0.32
PDGFA-201ENST00000354513 PKP2Q99959 881 aa13.04□□□□□ -0.32
PDGFA-201ENST00000354513 RNPEPL1Q9HAU8 725 aa13.04□□□□□ -0.32
PDGFA-201ENST00000354513 C14orf119Q9NWQ9 140 aa13.04□□□□□ -0.32
PDGFA-201ENST00000354513 RRP15Q9Y3B9 282 aaKnown RBP13.04□□□□□ -0.32
PDGFA-201ENST00000354513 RNF114Q9Y508 228 aa13.04□□□□□ -0.32
PDGFA-201ENST00000354513 KPTNQ9Y664 436 aa13.04□□□□□ -0.32
PDGFA-201ENST00000354513 TET2Q6N021 2002 aaPredicted RBP13.04□□□□□ -0.32
PDGFA-201ENST00000354513 FAM183AA6NL82 134 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 ANKRD30BLA7E2S9 258 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 RNASEK-C17orf49H0YIS7 233 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 TSPAN15O95858 294 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 ECDO95905 644 aaPredicted RBP13.03□□□□□ -0.32
PDGFA-201ENST00000354513 DDOSTP39656 456 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 TGM4P49221 684 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 ZNF121P58317 390 aaPredicted RBP13.03□□□□□ -0.32
PDGFA-201ENST00000354513 GRB2P62993 217 aaKnown RBP13.03□□□□□ -0.32
PDGFA-201ENST00000354513 KLRD1Q13241 179 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 EIF2B1Q14232 305 aaKnown RBP13.03□□□□□ -0.32
PDGFA-201ENST00000354513 GK3PQ14409 553 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 METAP1DQ6UB28 335 aaPredicted RBP13.03□□□□□ -0.32
PDGFA-201ENST00000354513 DPY19L4Q7Z388 723 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 TMEM179BQ7Z7N9 219 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 OR6K6Q8NGW6 343 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 TBC1D15Q8TC07 691 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 ITPKCQ96DU7 683 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 CENPNQ96H22 339 aaPredicted RBP13.03□□□□□ -0.32
PDGFA-201ENST00000354513 RBM4BQ9BQ04 359 aaKnown RBP13.03□□□□□ -0.32
PDGFA-201ENST00000354513 ABHD6Q9BV23 337 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 DGCR6LQ9BY27 220 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 CNTD2Q9H8S5 307 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 SIRT7Q9NRC8 400 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 ZNRD1Q9P1U0 126 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 KIF17Q9P2E2 1029 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 RHBDD3Q9Y3P4 386 aa13.03□□□□□ -0.32
PDGFA-201ENST00000354513 ANXA2P07355 339 aaKnown RBP13.02□□□□□ -0.33
PDGFA-201ENST00000354513 MUC1P15941 1255 aaPredicted RBP13.02□□□□□ -0.33
PDGFA-201ENST00000354513 ACKR3P25106 362 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 OPRL1P41146 370 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 GSK3AP49840 483 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 RCN1Q15293 331 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 TAF13Q15543 124 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 TIGD6Q17RP2 521 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 MICAQ29983 383 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 FAM57BQ71RH2 274 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 TIGD4Q8IY51 512 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 PQLC1Q8N2U9 271 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 PNKDQ8N490 385 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 LINC00471Q8N535 108 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 IQCF1Q8N6M8 205 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 ZSCAN4Q8NAM6 433 aaPredicted RBP13.02□□□□□ -0.33
PDGFA-201ENST00000354513 SCCPDHQ8NBX0 429 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 OR2T33Q8NG76 320 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 OR8S1Q8NH09 359 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 OR5K1Q8NHB7 308 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 C8orf46Q8TAG6 207 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 GIPC3Q8TF64 312 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 TNFRSF14Q92956 283 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 NIPSNAP1Q9BPW8 284 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 WDR13Q9H1Z4 485 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 MMP27Q9H306 513 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 TOR3AQ9H497 397 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 CMC2Q9NRP2 79 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 DNAJC27Q9NZQ0 273 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 BAIAP2Q9UQB8 552 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 DNAH3Q8TD57 4116 aa13.02□□□□□ -0.33
PDGFA-201ENST00000354513 A0A1B0GVI7 797 aa13.01□□□□□ -0.33
PDGFA-201ENST00000354513 CDIPTO14735 213 aa13.01□□□□□ -0.33
PDGFA-201ENST00000354513 MZT1Q08AG7 82 aa13.01□□□□□ -0.33
PDGFA-201ENST00000354513 ERI1Q8IV48 349 aaKnown RBP13.01□□□□□ -0.33
PDGFA-201ENST00000354513 HS3ST5Q8IZT8 346 aa13.01□□□□□ -0.33
PDGFA-201ENST00000354513 OR10G2Q8NGC3 310 aa13.01□□□□□ -0.33
PDGFA-201ENST00000354513 OR6N2Q8NGY6 317 aa13.01□□□□□ -0.33
PDGFA-201ENST00000354513 HPSE2Q8WWQ2 592 aa13.01□□□□□ -0.33
PDGFA-201ENST00000354513 LYZL4Q96KX0 146 aa13.01□□□□□ -0.33
PDGFA-201ENST00000354513 GAFA1Q96PS6 74 aa13.01□□□□□ -0.33
PDGFA-201ENST00000354513 INTS14Q96SY0 518 aa13.01□□□□□ -0.33
PDGFA-201ENST00000354513 DCTN5Q9BTE1 182 aa13.01□□□□□ -0.33
PDGFA-201ENST00000354513 ONECUT1Q9UBC0 465 aa13.01□□□□□ -0.33
PDGFA-201ENST00000354513 KLHDC2Q9Y2U9 406 aa13.01□□□□□ -0.33
PDGFA-201ENST00000354513 SAC3D1A6NKF1 404 aa13□□□□□ -0.33
PDGFA-201ENST00000354513 HSD11B1P28845 292 aa13□□□□□ -0.33
PDGFA-201ENST00000354513 DCTDP32321 178 aa13□□□□□ -0.33
PDGFA-201ENST00000354513 IKZF1Q13422 519 aa13□□□□□ -0.33
PDGFA-201ENST00000354513 MICBQ29980 383 aa13□□□□□ -0.33
PDGFA-201ENST00000354513 GFOD2Q3B7J2 385 aa13□□□□□ -0.33
PDGFA-201ENST00000354513 ATPAF1Q5TC12 328 aaPredicted RBP13□□□□□ -0.33
PDGFA-201ENST00000354513 OR5T2Q8NGG2 359 aa13□□□□□ -0.33
PDGFA-201ENST00000354513 RPL3LQ92901 407 aaKnown RBP13□□□□□ -0.33
PDGFA-201ENST00000354513 C12orf43Q96C57 262 aaKnown RBP13□□□□□ -0.33
PDGFA-201ENST00000354513 NRBF2Q96F24 287 aa13□□□□□ -0.33
PDGFA-201ENST00000354513 PAPOLGQ9BWT3 736 aaKnown RBP13□□□□□ -0.33
PDGFA-201ENST00000354513 C16orf95Q9H693 158 aa13□□□□□ -0.33
PDGFA-201ENST00000354513 DCLRE1BQ9H816 532 aa13□□□□□ -0.33
PDGFA-201ENST00000354513 DNAJB11Q9UBS4 358 aa13□□□□□ -0.33
PDGFA-201ENST00000354513 DSCAML1Q8TD84 2053 aa13□□□□□ -0.33
PDGFA-201ENST00000354513 A0A1W2PRD5 423 aa12.99□□□□□ -0.33
PDGFA-201ENST00000354513 A0A1W2PRF3 423 aa12.99□□□□□ -0.33
PDGFA-201ENST00000354513 A0A1W2PRM7 423 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms