RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 CPT1CQ8TCG5 803 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.16□□□□□ -0.3
NUP50-201ENST00000347635 DTX4Q9Y2E6 619 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 M0R135 149 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 TNFSF4P23510 183 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 CEBPEQ15744 281 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 DCAF12L2Q5VW00 463 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 RHBDD2Q6NTF9 364 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 SLC25A42Q86VD7 318 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 PPP1R35Q8TAP8 253 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 ZNF799Q96GE5 643 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 ZNF230Q9UIE0 474 aaPredicted RBP13.16□□□□□ -0.3
NUP50-201ENST00000347635 GREB1Q4ZG55 1949 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 TMEM218A2RU14 115 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 MKRN2OSH3BPM6 223 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 CST4P01036 141 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 CELA2BP08218 269 aaPredicted RBP13.15□□□□□ -0.3
NUP50-201ENST00000347635 CT45A8P0DMV1 189 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 CT45A9P0DMV2 189 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 CD37P11049 281 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 PIGPP57054 158 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 CT45A2Q5DJT8 189 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 RBMXL1Q96E39 390 aaKnown RBP13.15□□□□□ -0.3
NUP50-201ENST00000347635 ALX4Q9H161 411 aaPredicted RBP13.15□□□□□ -0.3
NUP50-201ENST00000347635 KCNE5Q9UJ90 142 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 TSC2P49815 1807 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 PLSCR5A0PG75 271 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 GPR31O00270 319 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 PPIAP62937 165 aaKnown RBP13.15□□□□□ -0.3
NUP50-201ENST00000347635 MRPS34P82930 218 aaKnown RBP13.15□□□□□ -0.3
NUP50-201ENST00000347635 ZNF345Q14585 488 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 PRSS54Q6PEW0 395 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 DGAT2L6Q6ZPD8 337 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 ARHGAP5-AS1Q96IT6 56 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 NXPH3O95157 252 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 H2AFB1P0C5Y9 115 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 EIF2S3LQ2VIR3 472 aaKnown RBP13.15□□□□□ -0.3
NUP50-201ENST00000347635 HIST2H3PS2Q5TEC6 136 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 JMJD6Q6NYC1 403 aaPredicted RBP13.15□□□□□ -0.3
NUP50-201ENST00000347635 NANPQ8TBE9 248 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 AK3Q9UIJ7 227 aa13.15□□□□□ -0.3
NUP50-201ENST00000347635 PTAFRP25105 342 aa13.15□□□□□ -0.31
NUP50-201ENST00000347635 AADACL3Q5VUY0 350 aa13.15□□□□□ -0.31
NUP50-201ENST00000347635 D2HGDHQ8N465 521 aa13.15□□□□□ -0.31
NUP50-201ENST00000347635 SOSTQ9BQB4 213 aa13.15□□□□□ -0.31
NUP50-201ENST00000347635 NMES1Q9C002 83 aa13.15□□□□□ -0.31
NUP50-201ENST00000347635 GLI4P10075 376 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 ADRA2CP18825 462 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 GALNSP34059 522 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 OPRM1P35372 400 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 RAB1AP62820 205 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 FUT7Q11130 342 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 SSPNQ14714 243 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 SFT2D1Q8WV19 159 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 ASB5Q8WWX0 329 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 SARAFQ96BY9 339 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 TRBV5-5A0A0J9YX44 114 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 ZNF587BE7ETH6 402 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 CYC1P08574 325 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 RAB32Q13637 225 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 RPS4Y2Q8TD47 263 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 HSD17B6O14756 317 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 CDC14BO60729 498 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 THBS4P35443 961 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 DMRTC1Q5HYR2 192 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 C1QL3Q5VWW1 255 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 UNQ9370/PRO34162Q6UXP9 181 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 LHFPL2Q6ZUX7 228 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 C8orf44Q96CB5 159 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 SPACA9Q96E40 222 aaPredicted RBP13.14□□□□□ -0.31
NUP50-201ENST00000347635 PIN1P1O15428 100 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 CD82P27701 267 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 KIR3DL2P43630 455 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 OR2B8PP59922 312 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 ECH1Q13011 328 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 SLC10A1Q14973 349 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 NHLRC3Q5JS37 347 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 RGS7BPQ6MZT1 257 aaPredicted RBP13.14□□□□□ -0.31
NUP50-201ENST00000347635 KIRREL1Q96J84 757 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 RASL12Q9NYN1 266 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 TNFSF18Q9UNG2 199 aa13.14□□□□□ -0.31
NUP50-201ENST00000347635 CBR3O75828 277 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 CRHP06850 196 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 LIPHQ8WWY8 451 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 SGK3Q96BR1 496 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 ZNF426Q9BUY5 554 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 FAM96BQ9Y3D0 163 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 URGCP-MRPS24S4R325 110 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 MYLKQ15746 1914 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 CHD5Q8TDI0 1954 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 PIKFYVEQ9Y2I7 2098 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 ZNF891A8MT65 544 aaPredicted RBP13.13□□□□□ -0.31
NUP50-201ENST00000347635 DFFBO76075 338 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 IFNA10P01566 189 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 NGFRP08138 427 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 GUSBP08236 651 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 SLC25A4P12235 298 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 CTRB1P17538 263 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 AADACP22760 399 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 GLRA1P23415 457 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms