RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 ZNF383Q8NA42 475 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 PP6455Q8WZ26 134 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 ARHGAP5-AS1Q96IT6 56 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 GHITMQ9H3K2 345 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 K7EQM0 130 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 OPN1MWP04001 364 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 NMBP08949 121 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 OPN1MW2P0DN77 364 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 OPN1MW3P0DN78 364 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 THBS4P35443 961 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 IL13RA2Q14627 380 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 CNEP1R1Q8N9A8 125 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 MORN4Q8NDC4 146 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 NT5CQ8TCD5 201 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 PACRGQ96M98 296 aaPredicted RBP15.69■□□□□ 0.1
SPAST-202ENST00000345662 RIMS4Q9H426 269 aaPredicted RBP15.69■□□□□ 0.1
SPAST-202ENST00000345662 RASL12Q9NYN1 266 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 ONECUT2O95948 504 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 PGA3P0DJD8 388 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 DAOP14920 347 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 ETFRF1Q6IPR1 90 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 ZNF793Q6ZN11 406 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 DUSP23Q9BVJ7 150 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 LMAN1LQ9HAT1 526 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 ALOX12BO75342 701 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 SULT1A1P50225 295 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 TIAL1Q01085 375 aaKnown RBP eCLIP15.69■□□□□ 0.1
SPAST-202ENST00000345662 PNRC1Q12796 327 aaPredicted RBP15.69■□□□□ 0.1
SPAST-202ENST00000345662 MARVELD3Q96A59 401 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 TECTBQ96PL2 329 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 GPR87Q9BY21 358 aa15.69■□□□□ 0.1
SPAST-202ENST00000345662 RBFOX3A6NFN3 312 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 C4orf47A7E2U8 309 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 UBE2G2P60604 165 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 OR13H1Q8NG92 308 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 OR5C1Q8NGR4 320 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 KTI12Q96EK9 354 aaPredicted RBP15.68■□□□□ 0.1
SPAST-202ENST00000345662 A0A1W2PNR3 127 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 GPANK1O95872 356 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 GZMMP51124 257 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 YBX1P67809 324 aaKnown RBP15.68■□□□□ 0.1
SPAST-202ENST00000345662 TMEM91Q6ZNR0 172 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 OXGR1Q96P68 337 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 A0A1B0GTH9 108 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 MFNGO00587 321 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 DVL1O14640 695 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 ADAP1O75689 374 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 PXNP49023 591 aaPredicted RBP15.68■□□□□ 0.1
SPAST-202ENST00000345662 CD81P60033 236 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 OR2B11Q5JQS5 317 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 PMCHP20382 165 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 ZNF345Q14585 488 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 RTL8AQ9BWD3 113 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 HS3ST3A1Q9Y663 406 aa15.68■□□□□ 0.1
SPAST-202ENST00000345662 IGHV3-20A0A0C4DH32 117 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 NKX2-2O95096 273 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 NAT2P11245 290 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 NKAIN2Q5VXU1 208 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 LIMS2Q7Z4I7 341 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 TMEM104Q8NE00 496 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 CA10Q9NS85 328 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 UBE2L5PA0A1B0GUS4 154 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 PRKNO60260 465 aaPredicted RBP15.67■□□□□ 0.1
SPAST-202ENST00000345662 PTBP3O95758 552 aaKnown RBP15.67■□□□□ 0.1
SPAST-202ENST00000345662 FAHP16930 419 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 PNLIPRP2P54317 469 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 EDDM3BP56851 147 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 PKIAP61925 76 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 FAM209BQ5JX69 171 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 FAM109BQ6ICB4 259 aaPredicted RBP15.67■□□□□ 0.1
SPAST-202ENST00000345662 OR2C3Q8N628 320 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 C11orf40Q8WZ69 217 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 ERGIC1Q969X5 290 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 SIRT3Q9NTG7 399 aaPredicted RBP15.67■□□□□ 0.1
SPAST-202ENST00000345662 DOCK2Q92608 1830 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 A0A1W2PNV4 684 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 MED19A0JLT2 244 aaPredicted RBP15.67■□□□□ 0.1
SPAST-202ENST00000345662 MASP2O00187 686 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 ST6GAL1P15907 406 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 ZNF17P17021 662 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 TCTEX1D1Q8N7M0 179 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 NAT6Q93015 286 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 PIK3IP1Q96FE7 263 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 SLC35E1Q96K37 410 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 TAAR9Q96RI9 348 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 PHIPQ8WWQ0 1821 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 PRRT4C9JH25 899 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 EDDM3AQ14507 147 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 ZNF683Q8IZ20 524 aa15.67■□□□□ 0.1
SPAST-202ENST00000345662 CXorf51AA0A1B0GTR3 108 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 FRG2CA6NGY1 282 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 OR7C2O60412 319 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 CXCL2P19875 107 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 SLC25A26Q70HW3 274 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 LINC00518Q8N0U6 118 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 MEGF10Q96KG7 1140 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 OR6C1Q96RD1 312 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 CHRDL1Q9BU40 450 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 GRPP07492 148 aa15.66■□□□□ 0.1
SPAST-202ENST00000345662 CCKARP32238 428 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms