RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 DNAJC8O75937 253 aaPredicted RBP10.28□□□□□ -0.76
SGCA-202ENST00000344627 LHBP01229 141 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 MRPL3P09001 348 aaKnown RBP10.28□□□□□ -0.76
SGCA-202ENST00000344627 CFHR2P36980 270 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 PRDX4Q13162 271 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 IKZF1Q13422 519 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 SLC35D3Q5M8T2 416 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 OLFML2AQ68BL7 652 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 RHOUQ7L0Q8 258 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 PRSS45Q7RTY3 260 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 SLC36A1Q7Z2H8 476 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 WDR86Q86TI4 376 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 PDZD9Q8IXQ8 264 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 NPRL2Q8WTW4 380 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 LRTOMTQ8WZ04 291 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 TAF15Q92804 592 aaKnown RBP eCLIP10.28□□□□□ -0.76
SGCA-202ENST00000344627 RPL3LQ92901 407 aaKnown RBP10.28□□□□□ -0.76
SGCA-202ENST00000344627 LHX4Q969G2 390 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 SEH1LQ96EE3 360 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 RNF170Q96K19 258 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 PAPOLBQ9NRJ5 636 aaKnown RBP10.28□□□□□ -0.76
SGCA-202ENST00000344627 ONECUT1Q9UBC0 465 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 POMPQ9Y244 141 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 KLHDC2Q9Y2U9 406 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 CAB39Q9Y376 341 aaPredicted RBP10.28□□□□□ -0.76
SGCA-202ENST00000344627 MPC1Q9Y5U8 109 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 TCRBV3S1A0A5B6 114 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 CLPSL1A2RUU4 121 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 NDUFB3O43676 98 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 MUC1P15941 1255 aaPredicted RBP10.27□□□□□ -0.77
SGCA-202ENST00000344627 MDKP21741 143 aaPredicted RBP10.27□□□□□ -0.77
SGCA-202ENST00000344627 OMGP23515 440 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 CRISP1P54107 249 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 RAG2P55895 527 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 ELF3P78545 371 aaPredicted RBP10.27□□□□□ -0.77
SGCA-202ENST00000344627 DEFA6Q01524 100 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 GABPB1Q06547 395 aaPredicted RBP10.27□□□□□ -0.77
SGCA-202ENST00000344627 WDR38Q5JTN6 314 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 LCN1P1Q5VSP4 162 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 KCTD18Q6PI47 426 aaPredicted RBP10.27□□□□□ -0.77
SGCA-202ENST00000344627 WDR82Q6UXN9 313 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 C11orf53Q8IXP5 236 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 GALNT4Q8N4A0 578 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 SCCPDHQ8NBX0 429 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 OR5T2Q8NGG2 359 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 OR8B12Q8NGG6 310 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 H1FXQ92522 213 aaKnown RBP10.27□□□□□ -0.77
SGCA-202ENST00000344627 PKP2Q99959 881 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 TTTY10Q9BZA0 68 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 MMP27Q9H306 513 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 NIPAL2Q9H841 368 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 CNTD2Q9H8S5 307 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 ABCB9Q9NP78 766 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 SNTG1Q9NSN8 517 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 H2AFY2Q9P0M6 372 aaPredicted RBP10.27□□□□□ -0.77
SGCA-202ENST00000344627 GTF2A1LQ9UNN4 478 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 LRP12Q9Y561 859 aa10.27□□□□□ -0.77
SGCA-202ENST00000344627 A0A0G2JK05 382 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 CENPVL3A0A0U1RRI6 287 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 TMEM269A0A1B0GVZ9 245 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 A0A1B0GW55 424 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 FAM181BA6NEQ2 426 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 NKX6-3A6NJ46 265 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 TMEM210A6NLX4 147 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 GSC2O15499 205 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 DUX4L2P0CJ85 424 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 DUX4L3P0CJ86 424 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 DUX4L4P0CJ87 422 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 DUX4L5P0CJ88 424 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 DUX4L6P0CJ89 424 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 DUX4L7P0CJ90 424 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 ACKR3P25106 362 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 MAP2K3P46734 347 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 PSMA6P60900 246 aaKnown RBP10.26□□□□□ -0.77
SGCA-202ENST00000344627 LRRC10Q5BKY1 277 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 TEX36Q5VZQ5 186 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 DUX4L9Q6RFH8 374 aaPredicted RBP10.26□□□□□ -0.77
SGCA-202ENST00000344627 GDPGP1Q6ZNW5 385 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 THAP5Q7Z6K1 395 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 ZDHHC23Q8IYP9 409 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 FGFRL1Q8N441 504 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 FAM216BQ8N7L0 139 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 DTX3Q8N9I9 347 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 WFDC12Q8WWY7 111 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 DNAJC9Q8WXX5 260 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 OR5P3Q8WZ94 311 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 SLC7A6OSQ96CW6 309 aaPredicted RBP10.26□□□□□ -0.77
SGCA-202ENST00000344627 ITPKCQ96DU7 683 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 LYZL4Q96KX0 146 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 TBX15Q96SF7 602 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 TEAD3Q99594 435 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 CITED1Q99966 193 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 MROQ9BYG7 248 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 YIPF3Q9GZM5 350 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 DPAGT1Q9H3H5 408 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 SLC25A19Q9HC21 320 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 ACOXLQ9NUZ1 547 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 KAAG1Q9UBP8 84 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 DUX4Q9UBX2 424 aa10.26□□□□□ -0.77
SGCA-202ENST00000344627 IKZF2Q9UKS7 526 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms