RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 MPC1Q9Y5U8 109 aa14.55□□□□□ -0.08
SMARCA4-201ENST00000344626 CA6P23280 308 aa14.55□□□□□ -0.08
SMARCA4-201ENST00000344626 PARD6AQ9NPB6 346 aa14.55□□□□□ -0.08
SMARCA4-201ENST00000344626 TRAV1-2A0A0B4J238 106 aa14.55□□□□□ -0.08
SMARCA4-201ENST00000344626 TMEM30CPA0ZSE6 113 aa14.55□□□□□ -0.08
SMARCA4-201ENST00000344626 ZNF354AO60765 605 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-201ENST00000344626 DGAT2L6Q6ZPD8 337 aa14.55□□□□□ -0.08
SMARCA4-201ENST00000344626 PTP4A1Q93096 173 aa14.55□□□□□ -0.08
SMARCA4-201ENST00000344626 CLDN1O95832 211 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 PLPPR5Q32ZL2 321 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 SOWAHCQ53LP3 525 aaPredicted RBP14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 STEAP3Q658P3 488 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 GIMAP1Q8WWP7 306 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 GPR35Q9HC97 309 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 HEYLQ9NQ87 328 aaPredicted RBP14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 CTLA4P16410 223 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 PRDX4Q13162 271 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 PCOLCEQ15113 449 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 TIPARPQ7Z3E1 657 aaKnown RBP14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 SIAH3Q8IW03 269 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 PELI1Q96FA3 418 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 PIGMQ9H3S5 423 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 ASF1BQ9NVP2 202 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 SLC23A1Q9UHI7 598 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 OR5B21A6NL26 309 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 TSPAN2O60636 221 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 AKR1C1Q04828 323 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 PHLDA2Q53GA4 152 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 RBMXL3Q8N7X1 1067 aaKnown RBP14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 DVL3Q92997 716 aaPredicted RBP14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 DPCDQ9BVM2 203 aaPredicted RBP14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 LPAR2Q9HBW0 351 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 RBFOX1Q9NWB1 397 aaKnown RBP14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 TRIM64CA6NLI5 447 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 SMIM10L1P0DMW3 83 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 S100PP25815 95 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 NPY4RP50391 375 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 OR13C5Q8NGS8 318 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 SDSLQ96GA7 329 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 SMIM10Q96HG1 83 aa14.54□□□□□ -0.08
SMARCA4-201ENST00000344626 TRBV5-3A0A0A0MS03 114 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 TPT1P13693 172 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 RAP2BP61225 183 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 PAQR8Q8TEZ7 354 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 TMEFF2Q9UIK5 374 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 MYO18BQ8IUG5 2567 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 OTOGLQ3ZCN5 2332 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 GPX5O75715 221 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 BGLAPP02818 100 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 TBPP20226 339 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 EPHA2P29317 976 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 SELENOPP49908 381 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 PDZD9Q8IXQ8 264 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 C1orf174Q8IYL3 243 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 OR5D13Q8NGL4 314 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 GALMQ96C23 342 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 TSNAXQ99598 290 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 MAMSTRQ6ZN01 415 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 OR10R2Q8NGX6 335 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 KCNIP2Q9NS61 270 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 EXOGQ9Y2C4 368 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 SULT1C2O00338 296 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 TSPAN15O95858 294 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 FABP5Q01469 135 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 PNLIPRP3Q17RR3 467 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 PRAMEF5Q5TYX0 476 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 PRAMEF6Q5VXH4 476 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 OPN3Q9H1Y3 402 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 SPG11Q96JI7 2443 aa14.53□□□□□ -0.08
SMARCA4-201ENST00000344626 MEIOCA2RUB1 952 aa14.52□□□□□ -0.08
SMARCA4-201ENST00000344626 SPRY1O43609 319 aaPredicted RBP14.52□□□□□ -0.08
SMARCA4-201ENST00000344626 FAM214BQ7L5A3 538 aa14.52□□□□□ -0.08
SMARCA4-201ENST00000344626 CATSPERDQ86XM0 798 aa14.52□□□□□ -0.08
SMARCA4-201ENST00000344626 MS4A5Q9H3V2 200 aa14.52□□□□□ -0.08
SMARCA4-201ENST00000344626 CACFD1Q9UGQ2 172 aa14.52□□□□□ -0.08
SMARCA4-201ENST00000344626 SERPINE3A8MV23 424 aa14.52□□□□□ -0.08
SMARCA4-201ENST00000344626 ST8SIA5O15466 376 aa14.52□□□□□ -0.08
SMARCA4-201ENST00000344626 FUT3P21217 361 aa14.52□□□□□ -0.08
SMARCA4-201ENST00000344626 CD79BP40259 229 aa14.52□□□□□ -0.08
SMARCA4-201ENST00000344626 RTP5Q14D33 572 aa14.52□□□□□ -0.08
SMARCA4-201ENST00000344626 P2RY6Q15077 328 aa14.52□□□□□ -0.08
SMARCA4-201ENST00000344626 TRAT1Q6PIZ9 186 aa14.52□□□□□ -0.08
SMARCA4-201ENST00000344626 GCM1Q9NP62 436 aa14.52□□□□□ -0.08
SMARCA4-201ENST00000344626 SNTB1Q13884 538 aaKnown RBP14.52□□□□□ -0.09
SMARCA4-201ENST00000344626 BTNL3Q6UXE8 466 aa14.52□□□□□ -0.09
SMARCA4-201ENST00000344626 THSD4Q6ZMP0 1018 aa14.52□□□□□ -0.09
SMARCA4-201ENST00000344626 CDC20BQ86Y33 519 aa14.52□□□□□ -0.09
SMARCA4-201ENST00000344626 ONECUT1Q9UBC0 465 aa14.52□□□□□ -0.09
SMARCA4-201ENST00000344626 MIA3Q5JRA6 1907 aa14.52□□□□□ -0.09
SMARCA4-201ENST00000344626 A0A0J9YW62 118 aa14.52□□□□□ -0.09
SMARCA4-201ENST00000344626 K7EPK0 472 aa14.52□□□□□ -0.09
SMARCA4-201ENST00000344626 WDR38Q5JTN6 314 aa14.52□□□□□ -0.09
SMARCA4-201ENST00000344626 NHLRC1Q6VVB1 395 aa14.52□□□□□ -0.09
SMARCA4-201ENST00000344626 FAM71E2Q8N5Q1 922 aa14.52□□□□□ -0.09
SMARCA4-201ENST00000344626 PRSS33Q8NF86 280 aa14.52□□□□□ -0.09
SMARCA4-201ENST00000344626 BORCS7Q96B45 105 aa14.52□□□□□ -0.09
SMARCA4-201ENST00000344626 UQCC2Q9BRT2 126 aa14.52□□□□□ -0.09
SMARCA4-201ENST00000344626 DLL4Q9NR61 685 aa14.52□□□□□ -0.09
SMARCA4-201ENST00000344626 TNFRSF19Q9NS68 423 aa14.52□□□□□ -0.09
SMARCA4-201ENST00000344626 PKDREJQ9NTG1 2253 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms