RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 ZDHHC23Q8IYP9 409 aa11.16□□□□□ -0.62
TUBD1-202ENST00000340993 SYS1Q8N2H4 156 aa11.16□□□□□ -0.62
TUBD1-202ENST00000340993 OR13C3Q8NGS6 347 aa11.16□□□□□ -0.62
TUBD1-202ENST00000340993 OR14K1Q8NGZ2 314 aa11.16□□□□□ -0.62
TUBD1-202ENST00000340993 TSEN15Q8WW01 171 aaKnown RBP11.16□□□□□ -0.62
TUBD1-202ENST00000340993 HPSE2Q8WWQ2 592 aa11.16□□□□□ -0.62
TUBD1-202ENST00000340993 RPL3LQ92901 407 aaKnown RBP11.16□□□□□ -0.62
TUBD1-202ENST00000340993 MYDGFQ969H8 173 aa11.16□□□□□ -0.62
TUBD1-202ENST00000340993 RNF170Q96K19 258 aa11.16□□□□□ -0.62
TUBD1-202ENST00000340993 DIRC2Q96SL1 478 aa11.16□□□□□ -0.62
TUBD1-202ENST00000340993 GSX1Q9H4S2 264 aaPredicted RBP11.16□□□□□ -0.62
TUBD1-202ENST00000340993 LPAR2Q9HBW0 351 aa11.16□□□□□ -0.62
TUBD1-202ENST00000340993 PLCXD1Q9NUJ7 323 aa11.16□□□□□ -0.62
TUBD1-202ENST00000340993 FKBP14Q9NWM8 211 aa11.16□□□□□ -0.62
TUBD1-202ENST00000340993 C1orf123Q9NWV4 160 aa11.16□□□□□ -0.62
TUBD1-202ENST00000340993 TPRKBQ9Y3C4 175 aa11.16□□□□□ -0.62
TUBD1-202ENST00000340993 MALRD1Q5VYJ5 2156 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 WNK2Q9Y3S1 2297 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.15□□□□□ -0.62
TUBD1-202ENST00000340993 ANKRD61A6NGH8 418 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 OR4C45A6NMZ5 311 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 CLDN25C9JDP6 229 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 MTRF1O75570 445 aaKnown RBP11.15□□□□□ -0.62
TUBD1-202ENST00000340993 IGLV3-1P01715 115 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 CD55P08174 381 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 UBCP0CG48 685 aaKnown RBP11.15□□□□□ -0.62
TUBD1-202ENST00000340993 HSMCR30P0CW71 290 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 ACHEP22303 614 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 NR4A2P43354 598 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 MED22Q15528 200 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 SFRP4Q6FHJ7 346 aaPredicted RBP11.15□□□□□ -0.62
TUBD1-202ENST00000340993 SPNS3Q6ZMD2 512 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 DNM1P46Q6ZS02 220 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 FTMTQ8N4E7 242 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 DEFB108BQ8NET1 73 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 OR5AK2Q8NH90 309 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 FGGYQ96C11 551 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 ORAI1Q96D31 301 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 OR5M11Q96RB7 305 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 TMEM106BQ9NUM4 274 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 NKIRAS2Q9NYR9 191 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 ENPP5Q9UJA9 477 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 ERGIC3Q9Y282 383 aa11.15□□□□□ -0.62
TUBD1-202ENST00000340993 FAM230AA0A1W2PPH8 454 aa11.14□□□□□ -0.63
TUBD1-202ENST00000340993 ZNF732B4DXR9 585 aa11.14□□□□□ -0.63
TUBD1-202ENST00000340993 RGS10O43665 173 aa11.14□□□□□ -0.63
TUBD1-202ENST00000340993 GMDSO60547 372 aa11.14□□□□□ -0.63
TUBD1-202ENST00000340993 NRASP01111 189 aa11.14□□□□□ -0.63
TUBD1-202ENST00000340993 CSF3P09919 207 aa11.14□□□□□ -0.63
TUBD1-202ENST00000340993 ZNF20P17024 532 aa11.14□□□□□ -0.63
TUBD1-202ENST00000340993 CRHBPP24387 322 aa11.14□□□□□ -0.63
TUBD1-202ENST00000340993 CD80P33681 288 aa11.14□□□□□ -0.63
TUBD1-202ENST00000340993 DDOSTP39656 456 aa11.14□□□□□ -0.63
TUBD1-202ENST00000340993 CDH15P55291 814 aa11.14□□□□□ -0.63
TUBD1-202ENST00000340993 RIN1Q13671 783 aa11.14□□□□□ -0.63
TUBD1-202ENST00000340993 ITPKCQ96DU7 683 aa11.14□□□□□ -0.63
TUBD1-202ENST00000340993 ADAT3Q96EY9 351 aaPredicted RBP11.14□□□□□ -0.63
TUBD1-202ENST00000340993 HIST1H2AAQ96QV6 131 aa11.14□□□□□ -0.63
TUBD1-202ENST00000340993 NKX3-1Q99801 234 aaPredicted RBP11.14□□□□□ -0.63
TUBD1-202ENST00000340993 COMMD4Q9H0A8 199 aa11.14□□□□□ -0.63
TUBD1-202ENST00000340993 BABAM2Q9NXR7 383 aa11.14□□□□□ -0.63
TUBD1-202ENST00000340993 WIPI2Q9Y4P8 454 aa11.14□□□□□ -0.63
TUBD1-202ENST00000340993 V9GYS6 101 aa11.14□□□□□ -0.63
TUBD1-202ENST00000340993 IGHV3OR15-7A0A075B7D8 119 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 CDIPTO14735 213 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 ADH4P08319 380 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 CD200P41217 278 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 SLC35A2P78381 396 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 CDK5R1Q15078 307 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 OR5P3Q8WZ94 311 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 RGP1Q92546 391 aaPredicted RBP11.13□□□□□ -0.63
TUBD1-202ENST00000340993 SEH1LQ96EE3 360 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 SPACA5Q96QH8 159 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 MICU1Q9BPX6 476 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 JAM3Q9BX67 310 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 SLC22A4Q9H015 551 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 TRIM36Q9NQ86 728 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 DLL4Q9NR61 685 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 ZNF391Q9UJN7 358 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 DOCK11Q5JSL3 2073 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 ZFHX3Q15911 3703 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 A0A1W2PPK0 400 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 TFF1P04155 84 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 INHBBP09529 407 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 IRF2P14316 349 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 USF1P22415 310 aaPredicted RBP11.13□□□□□ -0.63
TUBD1-202ENST00000340993 WNT4P56705 351 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 DSCR9P59020 149 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 ZNF154Q13106 437 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 CLVS2Q5SYC1 327 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 TMEM244Q5VVB8 128 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 PIP4P2Q8N4L2 257 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 NANOGP1Q8N7R0 232 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 OR1M1Q8NGA1 313 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 OR52N1Q8NH53 320 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 RFT1Q96AA3 541 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 C18orf12Q96KH6 178 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 MYCBPQ99417 103 aaPredicted RBP11.13□□□□□ -0.63
TUBD1-202ENST00000340993 GAL3ST1Q99999 423 aa11.13□□□□□ -0.63
TUBD1-202ENST00000340993 RTL8AQ9BWD3 113 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms