RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 RBM34P42696 430 aaKnown RBP13.36□□□□□ -0.27
BRAT1-201ENST00000340611 ACTA2P62736 377 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 ACTG2P63267 376 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 TNFRSF9Q07011 255 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 SCGB2B2Q4G0G5 96 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 LIPNQ5VXI9 398 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 LIN54Q6MZP7 749 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 KCNRGQ8N5I3 272 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 OR2T27Q8NH04 317 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 NKX3-1Q99801 234 aaPredicted RBP13.36□□□□□ -0.27
BRAT1-201ENST00000340611 CHST5Q9GZS9 411 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 EGLN1Q9GZT9 426 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 CRLF2Q9HC73 371 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 TMED7Q9Y3B3 224 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 PROB1E7EW31 1015 aa13.35□□□□□ -0.27
BRAT1-201ENST00000340611 IGHEP01854 428 aa13.35□□□□□ -0.27
BRAT1-201ENST00000340611 CYC1P08574 325 aa13.35□□□□□ -0.27
BRAT1-201ENST00000340611 MAPK3P27361 379 aaPredicted RBP13.35□□□□□ -0.27
BRAT1-201ENST00000340611 RAB4BP61018 213 aa13.35□□□□□ -0.27
BRAT1-201ENST00000340611 PKIAP61925 76 aa13.35□□□□□ -0.27
BRAT1-201ENST00000340611 PRR18Q8N4B5 295 aa13.35□□□□□ -0.27
BRAT1-201ENST00000340611 GPR148Q8TDV2 347 aa13.35□□□□□ -0.27
BRAT1-201ENST00000340611 DVL3Q92997 716 aaPredicted RBP13.35□□□□□ -0.27
BRAT1-201ENST00000340611 NMNAT3Q96T66 252 aa13.35□□□□□ -0.27
BRAT1-201ENST00000340611 CDV3Q9UKY7 258 aaKnown RBP13.35□□□□□ -0.27
BRAT1-201ENST00000340611 A0A1B0GTH9 108 aa13.35□□□□□ -0.27
BRAT1-201ENST00000340611 C11orf98E9PRG8 122 aa13.35□□□□□ -0.27
BRAT1-201ENST00000340611 ADRA2CP18825 462 aa13.35□□□□□ -0.27
BRAT1-201ENST00000340611 SLC6A6P31641 620 aa13.35□□□□□ -0.27
BRAT1-201ENST00000340611 RPS10P46783 165 aaKnown RBP13.35□□□□□ -0.27
BRAT1-201ENST00000340611 RSPO4Q2I0M5 234 aaPredicted RBP13.35□□□□□ -0.27
BRAT1-201ENST00000340611 UNQ9370/PRO34162Q6UXP9 181 aa13.35□□□□□ -0.27
BRAT1-201ENST00000340611 ZNF227Q86WZ6 799 aa13.35□□□□□ -0.27
BRAT1-201ENST00000340611 SYS1Q8N2H4 156 aa13.35□□□□□ -0.27
BRAT1-201ENST00000340611 HAVCR1Q96D42 359 aa13.35□□□□□ -0.27
BRAT1-201ENST00000340611 BSCL2Q96G97 398 aaPredicted RBP13.35□□□□□ -0.27
BRAT1-201ENST00000340611 METTL9Q9H1A3 318 aa13.35□□□□□ -0.27
BRAT1-201ENST00000340611 CHD8Q9HCK8 2581 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 A0A0B4J2A0 478 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 ZNF726A6NNF4 738 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 PLGP00747 810 aaPredicted RBP13.34□□□□□ -0.27
BRAT1-201ENST00000340611 SERPINA7P05543 415 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 RPL4P36578 427 aaKnown RBP13.34□□□□□ -0.27
BRAT1-201ENST00000340611 GLP1RP43220 463 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 HGFACQ04756 655 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 MEF2DQ14814 521 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 ZNF239Q16600 458 aaKnown RBP13.34□□□□□ -0.27
BRAT1-201ENST00000340611 NKAPLQ5M9Q1 402 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 OPN5Q6U736 354 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 TMPRSS7Q7RTY8 843 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 LRRC18Q8N456 261 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 KCNK15Q9H427 330 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 EXO5Q9H790 373 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 COMMD9Q9P000 198 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 SHPKQ9UHJ6 478 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 KLK13Q9UKR3 277 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 TP53TG5Q9Y2B4 290 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 GGT3PA6NGU5 568 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 RNASEK-C17orf49H0YIS7 233 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 MAS1P04201 325 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 SLC6A8P48029 635 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 FOXC1Q12948 553 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 ZNF74Q16587 644 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 OR2A2Q6IF42 318 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 ARHGAP11AQ6P4F7 1023 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 RASD2Q96D21 266 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 SIGLEC12Q96PQ1 595 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 GPR61Q9BZJ8 451 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 SELENOIQ9C0D9 397 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 SEC61A2Q9H9S3 476 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 ZNF281Q9Y2X9 895 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 DSPP15924 2871 aaKnown RBP13.34□□□□□ -0.27
BRAT1-201ENST00000340611 SVILO95425 2214 aa13.34□□□□□ -0.27
BRAT1-201ENST00000340611 A0A1W2PPE2 198 aa13.33□□□□□ -0.27
BRAT1-201ENST00000340611 PAX6P26367 422 aa13.33□□□□□ -0.27
BRAT1-201ENST00000340611 ID4P47928 161 aa13.33□□□□□ -0.27
BRAT1-201ENST00000340611 ATP1B3P54709 279 aa13.33□□□□□ -0.27
BRAT1-201ENST00000340611 OTPQ5XKR4 325 aa13.33□□□□□ -0.27
BRAT1-201ENST00000340611 STAC2Q6ZMT1 411 aa13.33□□□□□ -0.27
BRAT1-201ENST00000340611 ZNF813Q6ZN06 617 aa13.33□□□□□ -0.27
BRAT1-201ENST00000340611 GLB1L2Q8IW92 636 aa13.33□□□□□ -0.27
BRAT1-201ENST00000340611 NAXEQ8NCW5 288 aa13.33□□□□□ -0.27
BRAT1-201ENST00000340611 STEAP2Q8NFT2 490 aa13.33□□□□□ -0.27
BRAT1-201ENST00000340611 UTP23Q9BRU9 249 aaKnown RBP13.33□□□□□ -0.27
BRAT1-201ENST00000340611 OR2S2Q9NQN1 319 aa13.33□□□□□ -0.27
BRAT1-201ENST00000340611 DEPPQ9NTK1 212 aa13.33□□□□□ -0.27
BRAT1-201ENST00000340611 PINLYPA6NC86 204 aa13.33□□□□□ -0.28
BRAT1-201ENST00000340611 RNF222A6NCQ9 220 aa13.33□□□□□ -0.28
BRAT1-201ENST00000340611 H7C1C5 153 aa13.33□□□□□ -0.28
BRAT1-201ENST00000340611 TP53I11O14683 189 aa13.33□□□□□ -0.28
BRAT1-201ENST00000340611 HOXB5P09067 269 aa13.33□□□□□ -0.28
BRAT1-201ENST00000340611 OR8G3PP0DMU2 310 aa13.33□□□□□ -0.28
BRAT1-201ENST00000340611 PNMTP11086 282 aa13.33□□□□□ -0.28
BRAT1-201ENST00000340611 HOXA5P20719 270 aa13.33□□□□□ -0.28
BRAT1-201ENST00000340611 AGTR1P30556 359 aa13.33□□□□□ -0.28
BRAT1-201ENST00000340611 SFTPDP35247 375 aa13.33□□□□□ -0.28
BRAT1-201ENST00000340611 LCN6P62502 163 aa13.33□□□□□ -0.28
BRAT1-201ENST00000340611 PJVKQ0ZLH3 352 aa13.33□□□□□ -0.28
BRAT1-201ENST00000340611 AIMP2Q13155 320 aaKnown RBP13.33□□□□□ -0.28
BRAT1-201ENST00000340611 MAJINQ3KP22 176 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms