RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 TGFAP01135 160 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 IGHV2-5P01817 119 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 CCL1P22362 96 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 THBS2P35442 1172 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 CDH15P55291 814 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 NANOS3P60323 173 aaKnown RBP12.81□□□□□ -0.36
UBE3B-201ENST00000340074 HOXA4Q00056 320 aaPredicted RBP12.81□□□□□ -0.36
UBE3B-201ENST00000340074 DMRTC1Q5HYR2 192 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 CEP78Q5JTW2 689 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 ZBTB37Q5TC79 503 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 LAIR2Q6ISS4 152 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 Q6ZSR3 168 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 ZNF826PQ6ZT77 177 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 DOK3Q7L591 496 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 KRT74Q7RTS7 529 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 LRRC28Q86X40 367 aaPredicted RBP12.81□□□□□ -0.36
UBE3B-201ENST00000340074 C1orf87Q8N0U7 546 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 LINC01356Q8N9X3 169 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 OR1M1Q8NGA1 313 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 OR14K1Q8NGZ2 314 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 FBLIM1Q8WUP2 373 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 HPSE2Q8WWQ2 592 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 OR5P3Q8WZ94 311 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 MICU1Q9BPX6 476 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 RTL8AQ9BWD3 113 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 JAM3Q9BX67 310 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 FGF23Q9GZV9 251 aaPredicted RBP12.81□□□□□ -0.36
UBE3B-201ENST00000340074 VCX3BQ9H321 246 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 ABCB9Q9NP78 766 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 C1orf123Q9NWV4 160 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 ENPP5Q9UJA9 477 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 WNK2Q9Y3S1 2297 aa12.81□□□□□ -0.36
UBE3B-201ENST00000340074 A0A1B0GVI7 797 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 IRGMA1A4Y4 181 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 A8MV72 311 aaPredicted RBP12.8□□□□□ -0.36
UBE3B-201ENST00000340074 SYT7O43581 403 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 HTR1AP08908 422 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 LIMS3P0CW19 117 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 LIMS4P0CW20 117 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 DCKP27707 260 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 MDH2P40926 338 aaKnown RBP12.8□□□□□ -0.36
UBE3B-201ENST00000340074 ETV1P50549 477 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 CSNK2BP67870 215 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 ZNF154Q13106 437 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 TMEM155Q4W5P6 130 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 FAM166AQ6J272 317 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 FDX2Q6P4F2 183 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 C11orf53Q8IXP5 236 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 RDH10Q8IZV5 341 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 SYS1Q8N2H4 156 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 KLHL36Q8N4N3 616 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 RAB39BQ96DA2 213 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 RNF170Q96K19 258 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 RNF7Q9UBF6 113 aa12.8□□□□□ -0.36
UBE3B-201ENST00000340074 ANK3Q12955 4377 aaKnown RBP12.8□□□□□ -0.36
UBE3B-201ENST00000340074 PPIAL4EA0A075B759 164 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 hCG_1807616A0A1W2PRN6 198 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 B4DSR2 109 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 PPIAL4DF5H284 164 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 XPNPEP2O43895 674 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 LMX1BO60663 402 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 NRASP01111 189 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 UBCP0CG48 685 aaKnown RBP12.79□□□□□ -0.36
UBE3B-201ENST00000340074 PPIAL4FP0DN26 164 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 GPM6AP51674 278 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 ALKBH1Q13686 389 aaKnown RBP12.79□□□□□ -0.36
UBE3B-201ENST00000340074 CEACAM21Q3KPI0 293 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 KCTD8Q6ZWB6 473 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 MOB3CQ70IA8 216 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 SPICQ8N5J4 248 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 BOLLQ8N9W6 283 aaKnown RBP12.79□□□□□ -0.36
UBE3B-201ENST00000340074 C19orf18Q8NEA5 215 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 GGHQ92820 318 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 HIST1H2AAQ96QV6 131 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 LPAR2Q9HBW0 351 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 TMEM165Q9HC07 324 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 PCDHB10Q9UN67 800 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 DIMT1Q9UNQ2 313 aaKnown RBP12.79□□□□□ -0.36
UBE3B-201ENST00000340074 PPIAL4AQ9Y536 164 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 LOC107986453A0A1B0GWG9 222 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 TMEM210A6NLX4 147 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 DHRS7CA6NNS2 312 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 E9PI62 339 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 CCR9P51686 369 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 ST3GAL4Q11206 333 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 FAM76BQ5HYJ3 339 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 CLVS2Q5SYC1 327 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 PLCXD3Q63HM9 321 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 WDR82Q6UXN9 313 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 IZUMO2Q6UXV1 221 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 EGFL6Q8IUX8 553 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 MUC20Q8N307 709 aaPredicted RBP12.79□□□□□ -0.36
UBE3B-201ENST00000340074 BPIFB6Q8NFQ5 453 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 RPL3LQ92901 407 aaKnown RBP12.79□□□□□ -0.36
UBE3B-201ENST00000340074 TMEM80Q96HE8 168 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 TMEM246Q9BRR3 403 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 TLNRD1Q9H1K6 362 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 METTL17Q9H7H0 456 aaPredicted RBP12.79□□□□□ -0.36
UBE3B-201ENST00000340074 PLEKHA1Q9HB21 404 aa12.79□□□□□ -0.36
UBE3B-201ENST00000340074 GPR173Q9NS66 373 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms