RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 OR2AE1Q8NHA4 323 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 GLYATL2Q8WU03 294 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 DDIT4LQ96D03 193 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 ALX4Q9H161 411 aaPredicted RBP12.55□□□□□ -0.4
PCDH8-201ENST00000338862 FBRSQ9HAH7 460 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 MMP26Q9NRE1 261 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 FGF21Q9NSA1 209 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 A6NIZ1 184 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 IGHV3-9P01782 118 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 LCATP04180 440 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 PATE4P0C8F1 98 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 ZNF735P0CB33 412 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 RAP1BP61224 184 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 RAP1AP62834 184 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 VAMP2P63027 116 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 AWAT1Q58HT5 328 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 GKN2Q86XP6 184 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 NAA11Q9BSU3 229 aaPredicted RBP12.55□□□□□ -0.4
PCDH8-201ENST00000338862 MIOXQ9UGB7 285 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 CHD9Q3L8U1 2897 aa12.55□□□□□ -0.4
PCDH8-201ENST00000338862 IGLV1-36A0A0B4J1U3 117 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 TLX3O43711 291 aaPredicted RBP12.54□□□□□ -0.4
PCDH8-201ENST00000338862 MT-ATP6P00846 226 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 PRR18Q8N4B5 295 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 ZFP62Q8NB50 900 aaPredicted RBP12.54□□□□□ -0.4
PCDH8-201ENST00000338862 C2orf50Q96LR7 162 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 C5orf66Q9H5L9 145 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 MED9Q9NWA0 146 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 PIGLQ9Y2B2 252 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 PCNX3Q9H6A9 2034 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 DBHP09172 617 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 USF2Q15853 346 aaPredicted RBP12.54□□□□□ -0.4
PCDH8-201ENST00000338862 FAM209BQ5JX69 171 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 RNF166Q96A37 237 aaPredicted RBP12.54□□□□□ -0.4
PCDH8-201ENST00000338862 FAAP24Q9BTP7 215 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 OR51B6Q9H340 312 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 GHRLQ9UBU3 117 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 ZDBF2Q9HCK1 2354 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 IGHV3-64DA0A0J9YX35 117 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 PHF1O43189 567 aaPredicted RBP12.54□□□□□ -0.4
PCDH8-201ENST00000338862 IFNA2P01563 188 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 PNLIPP16233 465 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 HIST1H1DP16402 221 aaKnown RBP12.54□□□□□ -0.4
PCDH8-201ENST00000338862 CAPZBP47756 277 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 HOXA1P49639 335 aaPredicted RBP12.54□□□□□ -0.4
PCDH8-201ENST00000338862 HERV-K104P61576 105 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 PPA1Q15181 289 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 PLXDC2Q6UX71 529 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 TCTEX1D2Q8WW35 142 aa12.54□□□□□ -0.4
PCDH8-201ENST00000338862 MRPL24Q96A35 216 aaKnown RBP12.54□□□□□ -0.4
PCDH8-201ENST00000338862 GPX7Q96SL4 187 aaPredicted RBP12.54□□□□□ -0.4
PCDH8-201ENST00000338862 H3BP45 60 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 IGHG1P01857 330 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 CD1AP06126 327 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 LILRB1Q8NHL6 650 aaPredicted RBP12.53□□□□□ -0.4
PCDH8-201ENST00000338862 MFRPQ9BY79 579 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 CA14Q9ULX7 337 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 NCOR1O75376 2440 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 RALGAPA1Q6GYQ0 2036 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 CDRT15L2A8MXV6 281 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 FOLR1P15328 257 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 PTAFRP25105 342 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 PIGPP57054 158 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 RAB2AP61019 212 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 KIAA0141Q14154 515 aaPredicted RBP12.53□□□□□ -0.4
PCDH8-201ENST00000338862 ACTBL2Q562R1 376 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 SOHLH1Q5JUK2 328 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 DHRS11Q6UWP2 260 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 SUMF2Q8NBJ7 301 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 GPBAR1Q8TDU6 330 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 VN1R1Q9GZP7 353 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 SLC5A7Q9GZV3 580 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 UBE2J1Q9Y385 318 aaPredicted RBP12.53□□□□□ -0.4
PCDH8-201ENST00000338862 A6NCN8 305 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 CDC14BO60729 498 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 OR7C1O76099 320 aaPredicted RBP12.53□□□□□ -0.4
PCDH8-201ENST00000338862 SFT2D2O95562 160 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 ONECUT2O95948 504 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 GNMTQ14749 295 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 PCK2Q16822 640 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 UQCC3Q6UW78 93 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 C1QL2Q7Z5L3 287 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 ZDHHC22Q8N966 263 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 OR8B12Q8NGG6 310 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 PHYHIPLQ96FC7 376 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 CHST11Q9NPF2 352 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 C1orf123Q9NWV4 160 aa12.53□□□□□ -0.4
PCDH8-201ENST00000338862 ICE1Q9Y2F5 2266 aa12.52□□□□□ -0.4
PCDH8-201ENST00000338862 FRG2CA6NGY1 282 aa12.52□□□□□ -0.4
PCDH8-201ENST00000338862 ZNF217O75362 1048 aa12.52□□□□□ -0.4
PCDH8-201ENST00000338862 CST7O76096 145 aa12.52□□□□□ -0.4
PCDH8-201ENST00000338862 MYBPHQ13203 477 aa12.52□□□□□ -0.4
PCDH8-201ENST00000338862 RNF126Q9BV68 326 aa12.52□□□□□ -0.4
PCDH8-201ENST00000338862 FAM117AQ9C073 453 aa12.52□□□□□ -0.4
PCDH8-201ENST00000338862 TGIF2Q9GZN2 237 aa12.52□□□□□ -0.4
PCDH8-201ENST00000338862 SLC17A5Q9NRA2 495 aa12.52□□□□□ -0.4
PCDH8-201ENST00000338862 FAM212BQ9NTI7 297 aaPredicted RBP12.52□□□□□ -0.4
PCDH8-201ENST00000338862 PCOLCE2Q9UKZ9 415 aa12.52□□□□□ -0.4
PCDH8-201ENST00000338862 C7orf77A4D0Y5 90 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms