RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 MBD3L2Q8NHZ7 208 aaPredicted RBP14.09□□□□□ -0.15
HPS1-202ENST00000338546 TNFAIP8L1Q8WVP5 186 aa14.09□□□□□ -0.15
HPS1-202ENST00000338546 POM121Q96HA1 1249 aa14.09□□□□□ -0.15
HPS1-202ENST00000338546 SPACA5Q96QH8 159 aa14.09□□□□□ -0.15
HPS1-202ENST00000338546 NOX3Q9HBY0 568 aa14.09□□□□□ -0.15
HPS1-202ENST00000338546 NUDT15Q9NV35 164 aa14.09□□□□□ -0.15
HPS1-202ENST00000338546 LHX6Q9UPM6 363 aa14.09□□□□□ -0.15
HPS1-202ENST00000338546 K7ENP7 123 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 ICMTO60725 284 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 PRAF2O60831 178 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 COX5AP20674 150 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 IGHV1-2P23083 117 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 ATP1B3P54709 279 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 MTCP1P56278 107 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 RAB25P57735 213 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 ZP1P60852 638 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 RPS27AP62979 156 aaKnown RBP14.08□□□□□ -0.16
HPS1-202ENST00000338546 CARTPTQ16568 116 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 MOGAT2Q3SYC2 334 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 CDNFQ49AH0 187 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 HIKESHIQ53FT3 197 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 INO80CQ6PI98 192 aaPredicted RBP14.08□□□□□ -0.16
HPS1-202ENST00000338546 Q6ZTK2 550 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 ZNF584Q8IVC4 421 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 GABRG1Q8N1C3 465 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 ACBD4Q8NC06 268 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 OR6F1Q8NGZ6 308 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 UBASH3BQ8TF42 649 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 BORCS8Q96FH0 119 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 ZNF75AQ96N20 296 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 TM2D1Q9BX74 207 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.08□□□□□ -0.16
HPS1-202ENST00000338546 PCDHB16Q9NRJ7 776 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 GPR173Q9NS66 373 aa14.08□□□□□ -0.16
HPS1-202ENST00000338546 MYEF2Q9P2K5 600 aaKnown RBP14.08□□□□□ -0.16
HPS1-202ENST00000338546 RRP8O43159 456 aaKnown RBP14.07□□□□□ -0.16
HPS1-202ENST00000338546 WISP2O76076 250 aa14.07□□□□□ -0.16
HPS1-202ENST00000338546 MPIG6BO95866 241 aa14.07□□□□□ -0.16
HPS1-202ENST00000338546 CST4P01036 141 aa14.07□□□□□ -0.16
HPS1-202ENST00000338546 RCVRNP35243 200 aa14.07□□□□□ -0.16
HPS1-202ENST00000338546 VEGFCP49767 419 aa14.07□□□□□ -0.16
HPS1-202ENST00000338546 MECP2P51608 486 aaKnown RBP14.07□□□□□ -0.16
HPS1-202ENST00000338546 CCR6P51684 374 aa14.07□□□□□ -0.16
HPS1-202ENST00000338546 UBE2NP61088 152 aaKnown RBP14.07□□□□□ -0.16
HPS1-202ENST00000338546 MRPL49Q13405 166 aaKnown RBP14.07□□□□□ -0.16
HPS1-202ENST00000338546 GABRA6Q16445 453 aa14.07□□□□□ -0.16
HPS1-202ENST00000338546 PLEKHN1Q494U1 663 aaPredicted RBP14.07□□□□□ -0.16
HPS1-202ENST00000338546 RNF144BQ7Z419 303 aa14.07□□□□□ -0.16
HPS1-202ENST00000338546 TMEM104Q8NE00 496 aa14.07□□□□□ -0.16
HPS1-202ENST00000338546 PXT1Q8NFP0 134 aa14.07□□□□□ -0.16
HPS1-202ENST00000338546 MRPL15Q9P015 296 aaKnown RBP14.07□□□□□ -0.16
HPS1-202ENST00000338546 ZNF221Q9UK13 617 aa14.07□□□□□ -0.16
HPS1-202ENST00000338546 ING4Q9UNL4 249 aa14.07□□□□□ -0.16
HPS1-202ENST00000338546 PEX14O75381 377 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 CA11O75493 328 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 CRTAPO75718 401 aaPredicted RBP14.06□□□□□ -0.16
HPS1-202ENST00000338546 NDUFB6O95139 128 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 CYB5AP00167 134 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 CD74P04233 296 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 GTF2F2P13984 249 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 SPINK2P20155 84 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 TBPP20226 339 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 EIF2B2P49770 351 aaKnown RBP14.06□□□□□ -0.16
HPS1-202ENST00000338546 GUCA2AQ02747 115 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 CD300CQ08708 224 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 GK2Q14410 553 aaPredicted RBP14.06□□□□□ -0.16
HPS1-202ENST00000338546 TBC1D28Q2M2D7 210 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 SLC22A6Q4U2R8 563 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 RTL6Q6ICC9 239 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 STEAP1BQ6NZ63 245 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 ZNF585AQ6P3V2 769 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 MRPL21Q7Z2W9 205 aaKnown RBP14.06□□□□□ -0.16
HPS1-202ENST00000338546 MDP1Q86V88 176 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 GCNT2Q8N0V5 402 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 C17orf78Q8N4C9 275 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 CHST4Q8NCG5 386 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 RAB3CQ96E17 227 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 MRPS24Q96EL2 167 aaKnown RBP14.06□□□□□ -0.16
HPS1-202ENST00000338546 MED30Q96HR3 178 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 DOCK7Q96N67 2140 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 METTL9Q9H1A3 318 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 C20orf85Q9H1P6 137 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 OBP2BQ9NPH6 170 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 IL36GQ9NZH8 169 aa14.06□□□□□ -0.16
HPS1-202ENST00000338546 TRAV6A0A075B6T7 132 aa14.05□□□□□ -0.16
HPS1-202ENST00000338546 FIGNL2A6NMB9 653 aa14.05□□□□□ -0.16
HPS1-202ENST00000338546 CCNOP22674 350 aa14.05□□□□□ -0.16
HPS1-202ENST00000338546 CPT2P23786 658 aa14.05□□□□□ -0.16
HPS1-202ENST00000338546 UCNP55089 124 aa14.05□□□□□ -0.16
HPS1-202ENST00000338546 RRAS2P62070 204 aaPredicted RBP14.05□□□□□ -0.16
HPS1-202ENST00000338546 MEF2DQ14814 521 aa14.05□□□□□ -0.16
HPS1-202ENST00000338546 P2RY6Q15077 328 aa14.05□□□□□ -0.16
HPS1-202ENST00000338546 PPA1Q15181 289 aa14.05□□□□□ -0.16
HPS1-202ENST00000338546 SFRP4Q6FHJ7 346 aaPredicted RBP14.05□□□□□ -0.16
HPS1-202ENST00000338546 FAM180AQ6UWF9 173 aa14.05□□□□□ -0.16
HPS1-202ENST00000338546 CNEP1R1Q8N9A8 125 aa14.05□□□□□ -0.16
HPS1-202ENST00000338546 ZSCAN4Q8NAM6 433 aaPredicted RBP14.05□□□□□ -0.16
HPS1-202ENST00000338546 SLC30A7Q8NEW0 376 aa14.05□□□□□ -0.16
HPS1-202ENST00000338546 SELENOIQ9C0D9 397 aa14.05□□□□□ -0.16
HPS1-202ENST00000338546 GHITMQ9H3K2 345 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms