RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 EFNB2P52799 333 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 IFITM3Q01628 133 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 ZBTB37Q5TC79 503 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 OR10K2Q6IF99 312 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 UNQ6126/PRO20091Q6UXV3 157 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 IZUMO1Q8IYV9 350 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 FTMTQ8N4E7 242 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 PNLDC1Q8NA58 520 aaKnown RBP12.64□□□□□ -0.39
CBX3-201ENST00000337620 CSNK2A3Q8NEV1 391 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 OR4M2Q8NGB6 313 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 OR5D18Q8NGL1 313 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 SLC25A40Q8TBP6 338 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 UBASH3BQ8TF42 649 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 CMBLQ96DG6 245 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 S100A16Q96FQ6 103 aaKnown RBP12.64□□□□□ -0.39
CBX3-201ENST00000337620 ZC3HAV1LQ96H79 300 aaKnown RBP12.64□□□□□ -0.39
CBX3-201ENST00000337620 GPR160Q9UJ42 338 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 MRPS28Q9Y2Q9 187 aaKnown RBP12.64□□□□□ -0.39
CBX3-201ENST00000337620 CACNA1BQ00975 2339 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 UPK1BO75841 260 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 PRKACBP22694 351 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 CHRNB4P30926 498 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 PITPNBP48739 271 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 MTCP1P56278 107 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 NAAAQ02083 359 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 RIN1Q13671 783 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 GLIPR1L1Q6UWM5 242 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 FBXW12Q6X9E4 464 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 SSC4DQ8WTU2 575 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 RAB40AQ8WXH6 277 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 SPSB1Q96BD6 273 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 BORCS8Q96FH0 119 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 USB1Q9BQ65 265 aaKnown RBP12.64□□□□□ -0.39
CBX3-201ENST00000337620 ABCG5Q9H222 651 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 NEK6Q9HC98 313 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 CRIM1Q9NZV1 1036 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 SLC7A11Q9UPY5 501 aa12.64□□□□□ -0.39
CBX3-201ENST00000337620 FAM90A27PA6NNH2 459 aa12.63□□□□□ -0.39
CBX3-201ENST00000337620 PRDX4Q13162 271 aa12.63□□□□□ -0.39
CBX3-201ENST00000337620 PRR7Q8TB68 274 aa12.63□□□□□ -0.39
CBX3-201ENST00000337620 GAL3ST1Q99999 423 aa12.63□□□□□ -0.39
CBX3-201ENST00000337620 CCDC32Q9BV29 185 aa12.63□□□□□ -0.39
CBX3-201ENST00000337620 IGSF10Q6WRI0 2623 aa12.63□□□□□ -0.39
CBX3-201ENST00000337620 HEATR1Q9H583 2144 aaKnown RBP12.63□□□□□ -0.39
CBX3-201ENST00000337620 ANKRD30BLA7E2S9 258 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 CRYAAP02489 173 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 PTBP1P26599 531 aaKnown RBP eCLIP12.62□□□□□ -0.39
CBX3-201ENST00000337620 PTGFRP43088 359 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 RBP2P50120 134 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 FUT6P51993 359 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 CAPZA1P52907 286 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 ADORA2A-AS1P86434 159 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 BAK1Q16611 211 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 ZNF181Q2M3W8 571 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 Q8N402 240 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 GDPD1Q8N9F7 314 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 TNFAIP8L1Q8WVP5 186 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 FAM46BQ96A09 425 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 HAVCR1Q96D42 359 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 BCL2L14Q9BZR8 327 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 LILRA1O75019 489 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 BPNT1O95861 308 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 CST4P01036 141 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 CDK2P24941 298 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 ASCL1P50553 236 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 C3orf36Q3SXR2 165 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 CRIP3Q6Q6R5 217 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 LHFPL2Q6ZUX7 228 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 WFDC8Q8IUA0 241 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 KLF14Q8TD94 323 aaPredicted RBP12.62□□□□□ -0.39
CBX3-201ENST00000337620 ITFG2Q969R8 447 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 PHF21AQ96BD5 680 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 TECTBQ96PL2 329 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 ABHD1Q96SE0 405 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 ATG5Q9H1Y0 275 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 ING4Q9UNL4 249 aa12.62□□□□□ -0.39
CBX3-201ENST00000337620 IGKV1-27A0A075B6S5 117 aa12.61□□□□□ -0.39
CBX3-201ENST00000337620 CTAG2O75638 210 aa12.61□□□□□ -0.39
CBX3-201ENST00000337620 PLATP00750 562 aa12.61□□□□□ -0.39
CBX3-201ENST00000337620 VSIG8P0DPA2 414 aa12.61□□□□□ -0.39
CBX3-201ENST00000337620 RAC2P15153 192 aa12.61□□□□□ -0.39
CBX3-201ENST00000337620 MPV17P39210 176 aa12.61□□□□□ -0.39
CBX3-201ENST00000337620 ATP1B3P54709 279 aa12.61□□□□□ -0.39
CBX3-201ENST00000337620 TMEM69Q5SWH9 247 aa12.61□□□□□ -0.39
CBX3-201ENST00000337620 C1QTNF12Q5T7M4 302 aa12.61□□□□□ -0.39
CBX3-201ENST00000337620 STEAP3Q658P3 488 aa12.61□□□□□ -0.39
CBX3-201ENST00000337620 PYHIN1Q6K0P9 492 aa12.61□□□□□ -0.39
CBX3-201ENST00000337620 C1QL2Q7Z5L3 287 aa12.61□□□□□ -0.39
CBX3-201ENST00000337620 ZDHHC23Q8IYP9 409 aa12.61□□□□□ -0.39
CBX3-201ENST00000337620 DVL3Q92997 716 aaPredicted RBP12.61□□□□□ -0.39
CBX3-201ENST00000337620 CPNE2Q96FN4 548 aaPredicted RBP12.61□□□□□ -0.39
CBX3-201ENST00000337620 MARS2Q96GW9 593 aaKnown RBP12.61□□□□□ -0.39
CBX3-201ENST00000337620 HIST1H2AAQ96QV6 131 aa12.61□□□□□ -0.39
CBX3-201ENST00000337620 S100A13Q99584 98 aa12.61□□□□□ -0.39
CBX3-201ENST00000337620 ELL3Q9HB65 397 aaPredicted RBP12.61□□□□□ -0.39
CBX3-201ENST00000337620 FZR1Q9UM11 496 aa12.61□□□□□ -0.39
CBX3-201ENST00000337620 NKX2-6A6NCS4 301 aa12.61□□□□□ -0.39
CBX3-201ENST00000337620 LDLRAD4O15165 306 aa12.61□□□□□ -0.39
CBX3-201ENST00000337620 TMEM225BP0DP42 221 aa12.61□□□□□ -0.39
CBX3-201ENST00000337620 CA6P23280 308 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms