RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 ZNF773Q6PK81 442 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 ZDHHC23Q8IYP9 409 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 MS4A15Q8N5U1 240 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 OR10AD1Q8NGE0 317 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 OR5A2Q8NGI9 324 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 FCGR1BQ92637 280 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 ITPKCQ96DU7 683 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 MEGF10Q96KG7 1140 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 DHDHQ9UQ10 334 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 PRRC2AP48634 2157 aaKnown RBP13.03□□□□□ -0.32
SEC13-201ENST00000337354 IGHV1-69-2A0A0G2JMI3 117 aa13.03□□□□□ -0.32
SEC13-201ENST00000337354 NDUFS8O00217 210 aa13.03□□□□□ -0.32
SEC13-201ENST00000337354 GATBO75879 557 aaKnown RBP13.03□□□□□ -0.32
SEC13-201ENST00000337354 MAP2K4P45985 399 aa13.03□□□□□ -0.32
SEC13-201ENST00000337354 PDLIM4P50479 330 aa13.03□□□□□ -0.32
SEC13-201ENST00000337354 TMEM33P57088 247 aa13.03□□□□□ -0.32
SEC13-201ENST00000337354 TPBGQ13641 420 aa13.03□□□□□ -0.32
SEC13-201ENST00000337354 HFEQ30201 348 aa13.03□□□□□ -0.32
SEC13-201ENST00000337354 CLEC2AQ6UVW9 174 aa13.03□□□□□ -0.32
SEC13-201ENST00000337354 ZNF367Q7RTV3 350 aa13.03□□□□□ -0.32
SEC13-201ENST00000337354 LURAP1LQ8IV03 231 aa13.03□□□□□ -0.32
SEC13-201ENST00000337354 SERPINA12Q8IW75 414 aa13.03□□□□□ -0.32
SEC13-201ENST00000337354 OR13C3Q8NGS6 347 aa13.03□□□□□ -0.32
SEC13-201ENST00000337354 OR5P3Q8WZ94 311 aa13.03□□□□□ -0.32
SEC13-201ENST00000337354 FGGYQ96C11 551 aa13.03□□□□□ -0.32
SEC13-201ENST00000337354 PGLYRP3Q96LB9 341 aa13.03□□□□□ -0.32
SEC13-201ENST00000337354 NR1H4Q96RI1 486 aaPredicted RBP13.03□□□□□ -0.32
SEC13-201ENST00000337354 MGLLQ99685 303 aa13.03□□□□□ -0.32
SEC13-201ENST00000337354 RTL8AQ9BWD3 113 aa13.03□□□□□ -0.32
SEC13-201ENST00000337354 ANKRD61A6NGH8 418 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 OR5B21A6NL26 309 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 TMEM210A6NLX4 147 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 NCR1O76036 304 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 CD2P06729 351 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 HSMCR30P0CW71 290 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 ZNF20P17024 532 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 CLEC12BQ2HXU8 276 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 FAM76BQ5HYJ3 339 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 Q5PR19 223 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 DNM1P46Q6ZS02 220 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 MOB3CQ70IA8 216 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 UTS2BQ765I0 119 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 PARP16Q8N5Y8 322 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 ZFP41Q8N8Y5 198 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 OR51A4Q8NGJ6 313 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 OR5D14Q8NGL3 314 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 OR10AC1Q8NH08 325 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 ITLN1Q8WWA0 313 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 THRSPQ92748 146 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 UFD1Q92890 307 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 RNF170Q96K19 258 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 CHST5Q9GZS9 411 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 ZNF696Q9H7X3 374 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 CHODLQ9H9P2 273 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 GCM1Q9NP62 436 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 PPP1R3CQ9UQK1 317 aa13.02□□□□□ -0.33
SEC13-201ENST00000337354 A0A087WXM4 84 aa13.01□□□□□ -0.33
SEC13-201ENST00000337354 LOC100289279A0A1B0GTE1 492 aa13.01□□□□□ -0.33
SEC13-201ENST00000337354 H3BSH0 61 aa13.01□□□□□ -0.33
SEC13-201ENST00000337354 LY6HO94772 140 aa13.01□□□□□ -0.33
SEC13-201ENST00000337354 ALX3O95076 343 aa13.01□□□□□ -0.33
SEC13-201ENST00000337354 OCM2P0CE71 109 aa13.01□□□□□ -0.33
SEC13-201ENST00000337354 PCMT1P22061 227 aa13.01□□□□□ -0.33
SEC13-201ENST00000337354 COL8A2P25067 703 aa13.01□□□□□ -0.33
SEC13-201ENST00000337354 GNG3P63215 75 aa13.01□□□□□ -0.33
SEC13-201ENST00000337354 ZNF181Q2M3W8 571 aa13.01□□□□□ -0.33
SEC13-201ENST00000337354 Q499Y3 187 aa13.01□□□□□ -0.33
SEC13-201ENST00000337354 UBE2UQ5VVX9 321 aa13.01□□□□□ -0.33
SEC13-201ENST00000337354 ZNF525Q8N782 197 aa13.01□□□□□ -0.33
SEC13-201ENST00000337354 TSEN15Q8WW01 171 aaKnown RBP13.01□□□□□ -0.33
SEC13-201ENST00000337354 FAM168AQ92567 244 aa13.01□□□□□ -0.33
SEC13-201ENST00000337354 CCL17Q92583 94 aa13.01□□□□□ -0.33
SEC13-201ENST00000337354 ADAT3Q96EY9 351 aaPredicted RBP13.01□□□□□ -0.33
SEC13-201ENST00000337354 FN3KRPQ9HA64 309 aa13.01□□□□□ -0.33
SEC13-201ENST00000337354 NEK6Q9HC98 313 aa13.01□□□□□ -0.33
SEC13-201ENST00000337354 SLC7A11Q9UPY5 501 aa13.01□□□□□ -0.33
SEC13-201ENST00000337354 AKAP9Q99996 3911 aa13.01□□□□□ -0.33
SEC13-201ENST00000337354 TRBV5-5A0A0J9YX44 114 aa13□□□□□ -0.33
SEC13-201ENST00000337354 A6NIN4 97 aa13□□□□□ -0.33
SEC13-201ENST00000337354 LRRC30A6NM36 301 aa13□□□□□ -0.33
SEC13-201ENST00000337354 CDC14BO60729 498 aa13□□□□□ -0.33
SEC13-201ENST00000337354 CPEP16870 476 aa13□□□□□ -0.33
SEC13-201ENST00000337354 PSMA1P25786 263 aaKnown RBP13□□□□□ -0.33
SEC13-201ENST00000337354 GIFP27352 417 aa13□□□□□ -0.33
SEC13-201ENST00000337354 FUT6P51993 359 aa13□□□□□ -0.33
SEC13-201ENST00000337354 RPS11P62280 158 aaKnown RBP eCLIP13□□□□□ -0.33
SEC13-201ENST00000337354 DOC2BQ14184 412 aa13□□□□□ -0.33
SEC13-201ENST00000337354 CNN3Q15417 329 aaKnown RBP13□□□□□ -0.33
SEC13-201ENST00000337354 TRAM1Q15629 374 aa13□□□□□ -0.33
SEC13-201ENST00000337354 PLCXD3Q63HM9 321 aa13□□□□□ -0.33
SEC13-201ENST00000337354 TSPAN14Q8NG11 270 aa13□□□□□ -0.33
SEC13-201ENST00000337354 Q8TCH9 128 aa13□□□□□ -0.33
SEC13-201ENST00000337354 RGP1Q92546 391 aaPredicted RBP13□□□□□ -0.33
SEC13-201ENST00000337354 HPS1Q92902 700 aa13□□□□□ -0.33
SEC13-201ENST00000337354 ZCCHC4Q9H5U6 513 aa13□□□□□ -0.33
SEC13-201ENST00000337354 PPP1R3EQ9H7J1 279 aa13□□□□□ -0.33
SEC13-201ENST00000337354 PNMA8CA0A1B0GUJ8 204 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 LMX1BO60663 402 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 RP2O75695 350 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 GRPP07492 148 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms