RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 TRIM36Q9NQ86 728 aa13.31□□□□□ -0.28
MRPL55-202ENST00000336300 C1orf123Q9NWV4 160 aa13.31□□□□□ -0.28
MRPL55-202ENST00000336300 UBAP1Q9NZ09 502 aa13.31□□□□□ -0.28
MRPL55-202ENST00000336300 KCNS2Q9ULS6 477 aa13.31□□□□□ -0.28
MRPL55-202ENST00000336300 EXOSC1Q9Y3B2 195 aaKnown RBP13.31□□□□□ -0.28
MRPL55-202ENST00000336300 PPIAL4AQ9Y536 164 aa13.31□□□□□ -0.28
MRPL55-202ENST00000336300 ZANQ9Y493 2812 aa13.31□□□□□ -0.28
MRPL55-202ENST00000336300 DYSFO75923 2080 aa13.31□□□□□ -0.28
MRPL55-202ENST00000336300 CR1P17927 2039 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 EFCAB10A6NFE3 127 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 WNT9BO14905 357 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 FSTL3O95633 263 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 ATP6V1G2O95670 118 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 SERPINA3P01011 423 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 NRASP01111 189 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 PCMT1P22061 227 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 CPT2P23786 658 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 IL2RGP31785 369 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 CCR9P51686 369 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 AQP4P55087 323 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 LMO4P61968 165 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 CSNK2BP67870 215 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 CEACAM21Q3KPI0 293 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 WDR38Q5JTN6 314 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 CLVS2Q5SYC1 327 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 FDX2Q6P4F2 183 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 MOB3CQ70IA8 216 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 KRT74Q7RTS7 529 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 OR1M1Q8NGA1 313 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 OR5A2Q8NGI9 324 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 C1orf159Q96HA4 380 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 JAM3Q9BX67 310 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 DCAF16Q9NXF7 216 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 V9GYS6 101 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 CSPG4Q6UVK1 2322 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 MTORP42345 2549 aa13.3□□□□□ -0.28
MRPL55-202ENST00000336300 A0A1B0GTI1 187 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 LMX1BO60663 402 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 IGHV2-5P01817 119 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 FAHP16930 419 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 ZNF16P17020 682 aaPredicted RBP13.29□□□□□ -0.28
MRPL55-202ENST00000336300 CCL1P22362 96 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 PMELP40967 661 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 GNG3P63215 75 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 KRTAP1-1Q07627 177 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 ALKBH1Q13686 389 aaKnown RBP13.29□□□□□ -0.28
MRPL55-202ENST00000336300 ZMYND11Q15326 602 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 PLCXD3Q63HM9 321 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 PRSS35Q8N3Z0 413 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 STX19Q8N4C7 294 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 ZNF676Q8N7Q3 588 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 BPIFB6Q8NFQ5 453 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 OR14K1Q8NGZ2 314 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 OR51F2Q8NH61 342 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 C10orf35Q96D05 121 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 PELI1Q96FA3 418 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 PLCXD1Q9NUJ7 323 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 CNOT2Q9NZN8 540 aaKnown RBP13.29□□□□□ -0.28
MRPL55-202ENST00000336300 FRRS1LQ9P0K9 344 aa13.29□□□□□ -0.28
MRPL55-202ENST00000336300 DIMT1Q9UNQ2 313 aaKnown RBP13.29□□□□□ -0.28
MRPL55-202ENST00000336300 CAB39Q9Y376 341 aaPredicted RBP13.29□□□□□ -0.28
MRPL55-202ENST00000336300 ABCA1O95477 2261 aa13.28□□□□□ -0.28
MRPL55-202ENST00000336300 HIVEP2P31629 2446 aa13.28□□□□□ -0.28
MRPL55-202ENST00000336300 OR5B21A6NL26 309 aa13.28□□□□□ -0.28
MRPL55-202ENST00000336300 ISG15P05161 165 aa13.28□□□□□ -0.28
MRPL55-202ENST00000336300 CCDC159P0C7I6 412 aa13.28□□□□□ -0.28
MRPL55-202ENST00000336300 PIPP12273 146 aaPredicted RBP13.28□□□□□ -0.28
MRPL55-202ENST00000336300 GPM6AP51674 278 aa13.28□□□□□ -0.28
MRPL55-202ENST00000336300 ST3GAL4Q11206 333 aa13.28□□□□□ -0.28
MRPL55-202ENST00000336300 ZNF154Q13106 437 aa13.28□□□□□ -0.28
MRPL55-202ENST00000336300 CEP78Q5JTW2 689 aa13.28□□□□□ -0.28
MRPL55-202ENST00000336300 GLCCI1Q86VQ1 547 aa13.28□□□□□ -0.28
MRPL55-202ENST00000336300 BOLLQ8N9W6 283 aaKnown RBP13.28□□□□□ -0.28
MRPL55-202ENST00000336300 GGHQ92820 318 aa13.28□□□□□ -0.28
MRPL55-202ENST00000336300 TECTBQ96PL2 329 aa13.28□□□□□ -0.28
MRPL55-202ENST00000336300 COMMD4Q9H0A8 199 aa13.28□□□□□ -0.28
MRPL55-202ENST00000336300 ISG20L2Q9H9L3 353 aaKnown RBP13.28□□□□□ -0.28
MRPL55-202ENST00000336300 TMEM165Q9HC07 324 aa13.28□□□□□ -0.28
MRPL55-202ENST00000336300 SCN3BQ9NY72 215 aa13.28□□□□□ -0.28
MRPL55-202ENST00000336300 MIOXQ9UGB7 285 aa13.28□□□□□ -0.28
MRPL55-202ENST00000336300 SLC7A11Q9UPY5 501 aa13.28□□□□□ -0.28
MRPL55-202ENST00000336300 TANC2Q9HCD6 1990 aa13.27□□□□□ -0.28
MRPL55-202ENST00000336300 TRAV38-1A0A0B4J264 116 aa13.27□□□□□ -0.29
MRPL55-202ENST00000336300 LOC107986453A0A1B0GWG9 222 aa13.27□□□□□ -0.29
MRPL55-202ENST00000336300 ZNF732B4DXR9 585 aa13.27□□□□□ -0.29
MRPL55-202ENST00000336300 INAFM1C9JVW0 142 aa13.27□□□□□ -0.29
MRPL55-202ENST00000336300 CDIPTO14735 213 aa13.27□□□□□ -0.29
MRPL55-202ENST00000336300 NDUFA2O43678 99 aa13.27□□□□□ -0.29
MRPL55-202ENST00000336300 GATBO75879 557 aaKnown RBP13.27□□□□□ -0.29
MRPL55-202ENST00000336300 ZNF205O95201 554 aa13.27□□□□□ -0.29
MRPL55-202ENST00000336300 MSMBP08118 114 aa13.27□□□□□ -0.29
MRPL55-202ENST00000336300 LIMS3P0CW19 117 aa13.27□□□□□ -0.29
MRPL55-202ENST00000336300 LIMS4P0CW20 117 aa13.27□□□□□ -0.29
MRPL55-202ENST00000336300 THBS2P35442 1172 aa13.27□□□□□ -0.29
MRPL55-202ENST00000336300 KIR3DL2P43630 455 aa13.27□□□□□ -0.29
MRPL55-202ENST00000336300 DVL1P1P54792 670 aaPredicted RBP13.27□□□□□ -0.29
MRPL55-202ENST00000336300 FAM76BQ5HYJ3 339 aa13.27□□□□□ -0.29
MRPL55-202ENST00000336300 IZUMO2Q6UXV1 221 aa13.27□□□□□ -0.29
MRPL55-202ENST00000336300 Q6ZSR3 168 aa13.27□□□□□ -0.29
MRPL55-202ENST00000336300 NLRC3Q7RTR2 1065 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms