RNA–Protein interactions for RNA: ENST00000335922.9

FGFR1-202, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 4,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-202ENST00000335922 IFNA10P01566 189 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 IFNA4P05014 189 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 IL5P05113 134 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 MSX1P28360 303 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 HTR5AP47898 357 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 OGFOD3Q6PK18 319 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 SECTM1Q8WVN6 248 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 TAF9BQ9HBM6 251 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 GFOD1Q9NXC2 390 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 HLA-DOBP13765 273 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 RAG2P55895 527 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 MTCP1P56278 107 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 HSF1Q00613 529 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 SP6Q3SY56 376 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 C4orf17Q53FE4 359 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 BRICD5Q6PL45 260 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 BAP18Q8IXM2 172 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 OR1M1Q8NGA1 313 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 ARL5BQ96KC2 179 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 FN3KRPQ9HA64 309 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 HAO2Q9NYQ3 351 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 TCFL5Q9UL49 500 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 RFPL4AA6NLU0 287 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 OR6C76A6NM76 312 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 FTCDNL1E5RQL4 147 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 RFPL4AL1F8VTS6 287 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 IFNA1P01562 189 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 FTH1P19P0C7X4 201 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 MGMTP16455 207 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 FOXF1Q12946 379 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 C11orf87Q6NUJ2 197 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 H1FNTQ75WM6 255 aaPredicted RBP13.04□□□□□ -0.32
FGFR1-202ENST00000335922 MRPL41Q8IXM3 137 aaKnown RBP13.04□□□□□ -0.32
FGFR1-202ENST00000335922 MUCL1Q96DR8 90 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 MYOTQ9UBF9 498 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 WIF1Q9Y5W5 379 aa13.04□□□□□ -0.32
FGFR1-202ENST00000335922 FOXS1O43638 330 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 GFRA3O60609 400 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 LMX1BO60663 402 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 EFNA3P52797 238 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 OR1C1Q15619 314 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 ZSCAN4Q8NAM6 433 aaPredicted RBP13.03□□□□□ -0.32
FGFR1-202ENST00000335922 NMNAT2Q9BZQ4 307 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 COL4A6Q14031 1691 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 IGHV3-64DA0A0J9YX35 117 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 FRG2CA6NGY1 282 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 TAGLN2P37802 199 aaKnown RBP13.03□□□□□ -0.32
FGFR1-202ENST00000335922 NOTCH2Q04721 2471 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 OR2Y1Q8NGV0 311 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 PIGCQ92535 297 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 A0A1W2PQM1 296 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 FAM74A7A6NL05 159 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 GUSBP08236 651 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 CSF2RBP32927 897 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 EGR3Q06889 387 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 FAM74A3Q4VXF1 159 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 ZNF764Q96H86 408 aaPredicted RBP13.03□□□□□ -0.32
FGFR1-202ENST00000335922 SLC19A3Q9BZV2 496 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 PILRAQ9UKJ1 303 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 FREM3P0C091 2139 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 SCN8AQ9UQD0 1980 aa13.03□□□□□ -0.32
FGFR1-202ENST00000335922 ANGPTL7O43827 346 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 TESK1Q15569 626 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 TAF9Q16594 264 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 Q6ZRG5 221 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 CCDC71LQ8N9Z2 235 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 HPSE2Q8WWQ2 592 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 ROBO4Q8WZ75 1007 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 TMPRSS13Q9BYE2 586 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 DUSP13Q9UII6 198 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 TRGV8A0A0C4DH27 118 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 PPP1R2P9O14990 202 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 EIF1BO60739 113 aaKnown RBP13.02□□□□□ -0.32
FGFR1-202ENST00000335922 OR2F2O95006 317 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 RAB5CP51148 216 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 OR2F1Q13607 317 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 ARL6IP1Q15041 203 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 ATPAF1Q5TC12 328 aaPredicted RBP13.02□□□□□ -0.32
FGFR1-202ENST00000335922 C20orf196Q8IYI0 205 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 CMTM1Q8IZ96 169 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 BVESQ8NE79 360 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 PLPP5Q8NEB5 264 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 OR5L1Q8NGL2 311 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 SFT2D1Q8WV19 159 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 SPIN2AQ99865 258 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 SPIN2BQ9BPZ2 258 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 TXNIPQ9H3M7 391 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 NELFAQ9H3P2 528 aa13.02□□□□□ -0.32
FGFR1-202ENST00000335922 TMEM200CA6NKL6 621 aa13.02□□□□□ -0.33
FGFR1-202ENST00000335922 CLDN15P56746 228 aa13.02□□□□□ -0.33
FGFR1-202ENST00000335922 MOGAT2Q3SYC2 334 aa13.02□□□□□ -0.33
FGFR1-202ENST00000335922 ELFN2Q5R3F8 820 aa13.02□□□□□ -0.33
FGFR1-202ENST00000335922 LYG2Q86SG7 212 aa13.02□□□□□ -0.33
FGFR1-202ENST00000335922 SPICQ8N5J4 248 aa13.02□□□□□ -0.33
FGFR1-202ENST00000335922 KCNG3Q8TAE7 436 aa13.02□□□□□ -0.33
FGFR1-202ENST00000335922 NUBPLQ8TB37 319 aa13.02□□□□□ -0.33
FGFR1-202ENST00000335922 CPT1CQ8TCG5 803 aa13.02□□□□□ -0.33
FGFR1-202ENST00000335922 LURAP1Q96LR2 239 aa13.02□□□□□ -0.33
FGFR1-202ENST00000335922 SUCNR1Q9BXA5 334 aa13.02□□□□□ -0.33
FGFR1-202ENST00000335922 CNTD2Q9H8S5 307 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms