RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 TMEM272A0A1B0GTI8 110 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 HMSDA8MTL9 139 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 K7ERU9 68 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 CAMPP49913 170 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 DLK1P80370 383 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 FAM109BQ6ICB4 259 aaPredicted RBP8.85□□□□□ -0.99
COL4A6-201ENST00000334504 TCTN3Q6NUS6 607 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 PTOV1Q86YD1 416 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 STPG2Q8N412 459 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 OR5AU1Q8NGC0 362 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 NUBPLQ8TB37 319 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 TP53RKQ96S44 253 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 ZNF426Q9BUY5 554 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 AP5S1Q9NUS5 200 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 KIAA1456Q9P272 454 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 BAZ2AQ9UIF9 1905 aaKnown RBP8.85□□□□□ -0.99
COL4A6-201ENST00000334504 PRSS37A4D1T9 235 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 ATF1P18846 271 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 MEOX1P50221 254 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 AGERQ15109 404 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 PTCRAQ6ISU1 281 aaPredicted RBP8.85□□□□□ -0.99
COL4A6-201ENST00000334504 TGIF2LXQ8IUE1 241 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 OSR2Q8N2R0 312 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 OR10AD1Q8NGE0 317 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 OR5A2Q8NGI9 324 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 TMEM230Q96A57 120 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 UTP23Q9BRU9 249 aaKnown RBP8.85□□□□□ -0.99
COL4A6-201ENST00000334504 P2RY12Q9H244 342 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 FBXL17Q9UF56 701 aa8.85□□□□□ -0.99
COL4A6-201ENST00000334504 SIAH2O43255 324 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 HRASP01112 189 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 KRASP01116 189 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 ZBTB25P24278 435 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 SLC38A11Q08AI6 406 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 ELAVL1Q15717 326 aaKnown RBP8.84□□□□□ -0.99
COL4A6-201ENST00000334504 C9orf62Q8N4C0 152 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 OR52N5Q8NH56 324 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 MAP1LC3CQ9BXW4 147 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 SLC25A22Q9H936 323 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 FUT9Q9Y231 359 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 POLDIP2Q9Y2S7 368 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 TIMM10BQ9Y5J6 103 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 LIPGQ9Y5X9 500 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 PIK3C2AO00443 1686 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 CHD2O14647 1828 aaKnown RBP8.84□□□□□ -0.99
COL4A6-201ENST00000334504 WNT11O96014 354 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 IGF2P01344 180 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 OR2M3Q8NG83 312 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 VN1R17PQ8TDU5 208 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 TEX101Q9BY14 249 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 LRRC3CA6NJW4 275 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 CSN3P07498 182 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 EMDP50402 254 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 KCNAB1Q14722 419 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 TUSC1Q2TAM9 212 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 MARVELD1Q9BSK0 173 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 SLC17A2O00624 439 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 RHBDL1O75783 438 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 CD99P14209 185 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 SULT1A1P50225 295 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 COL5A1-AS1Q5SY13 56 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 LSRQ86X29 649 aaPredicted RBP8.84□□□□□ -0.99
COL4A6-201ENST00000334504 ARRDC1Q8N5I2 433 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 RHOVQ96L33 236 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 TMPRSS13Q9BYE2 586 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 RBM38Q9H0Z9 239 aaKnown RBP8.84□□□□□ -0.99
COL4A6-201ENST00000334504 C19orf53Q9UNZ5 99 aaPredicted RBP8.84□□□□□ -0.99
COL4A6-201ENST00000334504 MMACHCQ9Y4U1 282 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 NWD2Q9ULI1 1742 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 FBLL1A6NHQ2 334 aaKnown RBP8.84□□□□□ -0.99
COL4A6-201ENST00000334504 PRSS54Q6PEW0 395 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 OR6C1Q96RD1 312 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 SLC46A2Q9BY10 475 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 ASB1Q9Y576 335 aa8.84□□□□□ -0.99
COL4A6-201ENST00000334504 A0A1W2PR48 441 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 ZNF253O75346 499 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 DCDP81605 110 aaKnown RBP8.83□□□□□ -1
COL4A6-201ENST00000334504 TTC9Q92623 222 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 ANAPC16Q96DE5 110 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 HSF4Q9ULV5 492 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 PCDHGA9Q9Y5G4 932 aaKnown RBP8.83□□□□□ -1
COL4A6-201ENST00000334504 C7orf77A4D0Y5 90 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 PMS2P1A4D2B8 440 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 C5orf49A4QMS7 147 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 TMEM202A6NGA9 273 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 HPP00738 406 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 S100A4P26447 101 aaKnown RBP8.83□□□□□ -1
COL4A6-201ENST00000334504 HAAOP46952 286 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 ZNF121P58317 390 aaPredicted RBP8.83□□□□□ -1
COL4A6-201ENST00000334504 OR10A7Q8NGE5 316 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 MS4A6EQ96DS6 147 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 C1QTNF6Q9BXI9 259 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 LYRM4Q9HD34 91 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 NGBQ9NPG2 151 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 ANKRD10Q9NXR5 420 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 SERTM1A2A2V5 107 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 TMEM127O75204 238 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 DRD1P21728 446 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 MVDP53602 400 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 BSXQ3C1V8 233 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms