RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 FJX1Q86VR8 437 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 MARCH1Q8TCQ1 289 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 TAF9BQ9HBM6 251 aa10.5□□□□□ -0.73
HDAC6-201ENST00000334136 MRPS28Q9Y2Q9 187 aaKnown RBP10.5□□□□□ -0.73
HDAC6-201ENST00000334136 CDK2AP1O14519 115 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 ZNF354AO60765 605 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-201ENST00000334136 IGF2P01344 180 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 UBE2KP61086 200 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 MYBPHQ13203 477 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 LSRQ86X29 649 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-201ENST00000334136 OR2M3Q8NG83 312 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 APH1AQ96BI3 265 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 KTI12Q96EK9 354 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-201ENST00000334136 SLCO5A1Q9H2Y9 848 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 NME2P1O60361 137 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 IGHV3-9P01782 118 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 LCATP04180 440 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 GLAP06280 429 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 ALOX5APP20292 161 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 RAG2P55895 527 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 HSF1Q00613 529 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 RPL18Q07020 188 aaKnown RBP10.49□□□□□ -0.73
HDAC6-201ENST00000334136 EXOSC6Q5RKV6 272 aaKnown RBP10.49□□□□□ -0.73
HDAC6-201ENST00000334136 OR52W1Q6IF63 320 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 ZNF770Q6IQ21 691 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-201ENST00000334136 SLC43A2Q8N370 569 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 FAM71CQ8NEG0 241 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 OR1M1Q8NGA1 313 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 LHFPL5Q8TAF8 219 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 CPNE4Q96A23 557 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-201ENST00000334136 GHITMQ9H3K2 345 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 KCNK15Q9H427 330 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 OR52A1Q9UKL2 312 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 KCNS2Q9ULS6 477 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 SLC7A11Q9UPY5 501 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 LOC107986453A0A1B0GWG9 222 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 XRCC3O43542 346 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 GPANK1O95872 356 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 NGFRP08138 427 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 HRH1P35367 487 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 CLN3Q13286 438 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 SKP2Q13309 424 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 ZNF385CQ66K41 422 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-201ENST00000334136 FBXW12Q6X9E4 464 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 NAA40Q86UY6 237 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 ZNF695Q8IW36 515 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 MED12Q93074 2177 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 EXOGQ9Y2C4 368 aaKnown RBP10.49□□□□□ -0.73
HDAC6-201ENST00000334136 ZNF175Q9Y473 711 aa10.49□□□□□ -0.73
HDAC6-201ENST00000334136 TMEM200CA6NKL6 621 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 SELENOVP59797 346 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 OR2W3Q7Z3T1 314 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 CCDC54Q8NEL0 328 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 HSD17B8Q92506 261 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 OR5B12Q96R08 314 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 ANGPTL4Q9BY76 406 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 CA10Q9NS85 328 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 SLCO1C1Q9NYB5 712 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 PRAMEF27A3QJZ7 478 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 OR6C68A6NDL8 312 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 TUBAL3A6NHL2 446 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 ITGB2P05107 769 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 GABRA1P14867 456 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 ZNF44P15621 663 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 EFNA3P52797 238 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 CRYBA2P53672 197 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 KIAA0141Q14154 515 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-201ENST00000334136 INPP5JQ15735 1006 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-201ENST00000334136 LPCAT3Q6P1A2 487 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 TMEM65Q6PI78 240 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 GLIPR1L1Q6UWM5 242 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 UNQ6494/PRO21346Q6UXR6 183 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 OR1S2Q8NGQ3 325 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 SPACA1Q9HBV2 294 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 ZFP57Q9NU63 452 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 FAM96BQ9Y3D0 163 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 DCTN6O00399 190 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 CHATP28329 748 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 SDHAP31040 664 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 RPL27P61353 136 aaKnown RBP10.48□□□□□ -0.73
HDAC6-201ENST00000334136 PMP22Q01453 160 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 FUT5Q11128 374 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 CBLN2Q8IUK8 224 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 PRR18Q8N4B5 295 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 SLC22A24Q8N4F4 322 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 MUCL1Q96DR8 90 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 ARL5BQ96KC2 179 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 OXGR1Q96P68 337 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 HES7Q9BYE0 225 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 FOXJ3Q9UPW0 622 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 CACNA1DQ01668 2161 aa10.48□□□□□ -0.73
HDAC6-201ENST00000334136 A0A0B4J293 547 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 ZNF587BE7ETH6 402 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 SEMG1P04279 462 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 IL5P05113 134 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 GNB3P16520 340 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 CX3CR1P49238 355 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 AGFG1P52594 562 aaKnown RBP10.47□□□□□ -0.73
HDAC6-201ENST00000334136 DOC2BQ14184 412 aa10.47□□□□□ -0.73
HDAC6-201ENST00000334136 BATFQ16520 125 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms