RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 RNF170Q96K19 258 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 RNPEPL1Q9HAU8 725 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 PATZ1Q9HBE1 687 aaKnown RBP11.77□□□□□ -0.53
LIMS1-201ENST00000332345 LPAR2Q9HBW0 351 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 TRIM36Q9NQ86 728 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 HIF1ANQ9NWT6 349 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 MIOXQ9UGB7 285 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 ENPP5Q9UJA9 477 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 SLC22A13Q9Y226 551 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 PIGLQ9Y2B2 252 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 HSPE1-MOB4S4R3N1 261 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 SVEP1Q4LDE5 3571 aa11.77□□□□□ -0.53
LIMS1-201ENST00000332345 WNK2Q9Y3S1 2297 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 ABCA2Q9BZC7 2435 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 hCG_1807616A0A1W2PRN6 198 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 IRGMA1A4Y4 181 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 TMEM210A6NLX4 147 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 DHRS7CA6NNS2 312 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 H0YHG0 523 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 J3QLW9 94 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 P2RY10O00398 339 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 PLPP2O43688 288 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 FOXH1O75593 365 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 ZNF205O95201 554 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 CLIC3O95833 236 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 ZNF12P17014 697 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 ZNF19P17023 458 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 RBMXP38159 391 aaKnown RBP11.76□□□□□ -0.53
LIMS1-201ENST00000332345 CAPGP40121 348 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 OR12D2P58182 307 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 ISL1P61371 349 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 HNRNPA0Q13151 305 aaKnown RBP11.76□□□□□ -0.53
LIMS1-201ENST00000332345 CEACAM21Q3KPI0 293 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 KCTD8Q6ZWB6 473 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 ZNF771Q7L3S4 317 aaPredicted RBP11.76□□□□□ -0.53
LIMS1-201ENST00000332345 LHFPL3Q86UP9 236 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 OR1M1Q8NGA1 313 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 OR5A2Q8NGI9 324 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 APH1BQ8WW43 257 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 PPP1R3EQ9H7J1 279 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 NKX1-2Q9UD57 310 aaPredicted RBP11.76□□□□□ -0.53
LIMS1-201ENST00000332345 V9GYS6 101 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 NAV3Q8IVL0 2385 aa11.76□□□□□ -0.53
LIMS1-201ENST00000332345 TRAV38-1A0A0B4J264 116 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 A0A1B0GTI1 187 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 A0A1B0GVI7 797 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 SYT7O43581 403 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 NDUFA2O43678 99 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 WBP4O75554 376 aaKnown RBP11.75□□□□□ -0.53
LIMS1-201ENST00000332345 NRASP01111 189 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 IGHA1P01876 353 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 UBCP0CG48 685 aaKnown RBP11.75□□□□□ -0.53
LIMS1-201ENST00000332345 FAHP16930 419 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 CFHR2P36980 270 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 GNG3P63215 75 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 ZNF154Q13106 437 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 ODF4Q2M2E3 257 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 CR1LQ2VPA4 569 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 ZNF404Q494X3 552 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 FAM76BQ5HYJ3 339 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 FAM201AQ5SY85 155 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 CLVS2Q5SYC1 327 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 FAM120AOSQ5T036 256 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 FDX2Q6P4F2 183 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 Q6ZSR3 168 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 ZNF826PQ6ZT77 177 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 MOB3CQ70IA8 216 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 C11orf53Q8IXP5 236 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 C8orf59Q8N0T1 100 aaPredicted RBP11.75□□□□□ -0.53
LIMS1-201ENST00000332345 BOLLQ8N9W6 283 aaKnown RBP11.75□□□□□ -0.53
LIMS1-201ENST00000332345 DEFB108BQ8NET1 73 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 OR52I1Q8NGK6 324 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 OR14K1Q8NGZ2 314 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 POM121Q96HA1 1249 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 TMEM246Q9BRR3 403 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 ALG8Q9BVK2 526 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 ACOXLQ9NUZ1 547 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 ERVK13-1Q9NX77 482 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 MYRFQ9Y2G1 1151 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 NF1P21359 2839 aa11.75□□□□□ -0.53
LIMS1-201ENST00000332345 CEACAM18A8MTB9 384 aa11.74□□□□□ -0.53
LIMS1-201ENST00000332345 H0YJX3 145 aa11.74□□□□□ -0.53
LIMS1-201ENST00000332345 LGALS8O00214 317 aa11.74□□□□□ -0.53
LIMS1-201ENST00000332345 CDIPTO14735 213 aa11.74□□□□□ -0.53
LIMS1-201ENST00000332345 LHBP01229 141 aa11.74□□□□□ -0.53
LIMS1-201ENST00000332345 RPSAP08865 295 aaKnown RBP11.74□□□□□ -0.53
LIMS1-201ENST00000332345 HTR1AP08908 422 aa11.74□□□□□ -0.53
LIMS1-201ENST00000332345 WNT2P09544 360 aa11.74□□□□□ -0.53
LIMS1-201ENST00000332345 CCL1P22362 96 aa11.74□□□□□ -0.53
LIMS1-201ENST00000332345 GATA3P23771 443 aa11.74□□□□□ -0.53
LIMS1-201ENST00000332345 DCKP27707 260 aa11.74□□□□□ -0.53
LIMS1-201ENST00000332345 THBS2P35442 1172 aa11.74□□□□□ -0.53
LIMS1-201ENST00000332345 PSMB10P40306 273 aa11.74□□□□□ -0.53
LIMS1-201ENST00000332345 GPM6AP51674 278 aa11.74□□□□□ -0.53
LIMS1-201ENST00000332345 CCR9P51686 369 aa11.74□□□□□ -0.53
LIMS1-201ENST00000332345 MRPL28Q13084 256 aaKnown RBP11.74□□□□□ -0.53
LIMS1-201ENST00000332345 SMN1Q16637 294 aaKnown RBP11.74□□□□□ -0.53
LIMS1-201ENST00000332345 ESCO2Q56NI9 601 aa11.74□□□□□ -0.53
LIMS1-201ENST00000332345 WDR38Q5JTN6 314 aa11.74□□□□□ -0.53
LIMS1-201ENST00000332345 CEP78Q5JTW2 689 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms