RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 A0A1B0GTI1 187 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 TRAPPC2LH3BP13 241 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 OVOL3O00110 214 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 LGALS8O00214 317 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 PNPP00491 289 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 F12P00748 615 aaPredicted RBP4.42□□□□□ -1.7
LRIT3-201ENST00000327908 RAB6AP20340 208 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 MPZP25189 248 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 GIFP27352 417 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 TGFBR2P37173 567 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 PSG7Q13046 419 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 TSC22D1Q15714 1073 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 MPV17LQ2QL34 196 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 NHLRC3Q5JS37 347 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 LAIR2Q6ISS4 152 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 CNTRLQ7Z7A1 2325 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 FGFBP3Q8TAT2 258 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 OR5P3Q8WZ94 311 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 DERL3Q96Q80 235 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 GPER1Q99527 375 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 RHNO1Q9BSD3 238 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 FAM234AQ9H0X4 552 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 CCDC59Q9P031 241 aaKnown RBP4.42□□□□□ -1.7
LRIT3-201ENST00000327908 MIOXQ9UGB7 285 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 DUSP13Q9UII6 198 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 METTL21EPA6NDL7 271 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 ZNHIT1O43257 154 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 AIREO43918 545 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 DANCRP0C864 163 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 CD36P16671 472 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 GATA3P23771 443 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 MDH2P40926 338 aaKnown RBP4.42□□□□□ -1.7
LRIT3-201ENST00000327908 ZNF92Q03936 586 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 RAB11BQ15907 218 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 CD276Q5ZPR3 534 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 ZNF529Q6P280 563 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 PLXDC2Q6UX71 529 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 SPATC1Q76KD6 591 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 SLC36A1Q7Z2H8 476 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 BCDIN3DQ7Z5W3 292 aaKnown RBP4.42□□□□□ -1.7
LRIT3-201ENST00000327908 CEACAM19Q7Z692 300 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 OR5D13Q8NGL4 314 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 OR13F1Q8NGS4 319 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 KCNG3Q8TAE7 436 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 UBE2FQ969M7 185 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 RNF170Q96K19 258 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 FOXN4Q96NZ1 517 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 MRPL37Q9BZE1 423 aaKnown RBP4.42□□□□□ -1.7
LRIT3-201ENST00000327908 PLEKHF2Q9H8W4 249 aa4.42□□□□□ -1.7
LRIT3-201ENST00000327908 ANKRD11Q6UB99 2663 aaPredicted RBP4.42□□□□□ -1.7
LRIT3-201ENST00000327908 NOTOA8MTQ0 251 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 KNG1P01042 644 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 CHRM2P08172 466 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 AZGP1P25311 298 aaKnown RBP4.41□□□□□ -1.7
LRIT3-201ENST00000327908 CRYBB2P43320 205 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 MFGE8Q08431 387 aaPredicted RBP4.41□□□□□ -1.7
LRIT3-201ENST00000327908 RBM39Q14498 530 aaKnown RBP4.41□□□□□ -1.7
LRIT3-201ENST00000327908 C1orf100Q5SVJ3 147 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 ZNF787Q6DD87 383 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 ELP2Q6IA86 826 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 MOB1BQ7L9L4 216 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 ZNF554Q86TJ5 538 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 WDFY1Q8IWB7 410 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 POC1AQ8NBT0 407 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 ZNRF4Q8WWF5 429 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 PIGCQ92535 297 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 PHF21AQ96BD5 680 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 EXOSC4Q9NPD3 245 aaKnown RBP4.41□□□□□ -1.7
LRIT3-201ENST00000327908 IGHV1-69-2A0A0G2JMI3 117 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 hCG_1809904A0A1W2PP81 198 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 A0A1W2PPE2 198 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 A0A1W2PR64 198 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 A0A1W2PRV1 198 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 PQLC2LA1A4F0 135 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 GABRPO00591 440 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 ZFPL1O95159 310 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 GABARAPO95166 117 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 CSTBP04080 98 aaKnown RBP4.41□□□□□ -1.7
LRIT3-201ENST00000327908 CELA3BP08861 270 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 PATE4P0C8F1 98 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 GADD45AP24522 165 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 PTBP1P26599 531 aaKnown RBP eCLIP4.41□□□□□ -1.7
LRIT3-201ENST00000327908 C21orf33P30042 268 aaPredicted RBP4.41□□□□□ -1.7
LRIT3-201ENST00000327908 PSMB10P40306 273 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 GZMKP49863 264 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 NEDD8Q15843 81 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 DEFB113Q30KQ7 82 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 DDI2Q5TDH0 399 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 OR2G6Q5TZ20 316 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 OR2T2Q6IF00 324 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 ALKBH2Q6NS38 261 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 VHLLQ6RSH7 139 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 SSX6Q7RTT6 188 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 PRSS35Q8N3Z0 413 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 RAB40AQ8WXH6 277 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 TMEM106AQ96A25 262 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 YIPF6Q96EC8 236 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 MS4A3Q96HJ5 214 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 PGLYRP3Q96LB9 341 aa4.41□□□□□ -1.7
LRIT3-201ENST00000327908 LURAP1Q96LR2 239 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms