RNA–Protein interactions for RNA: ENST00000325599.12

SHQ1-201, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHQ1, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-201ENST00000325599 LRRC18Q8N456 261 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 OR5M9Q8NGP3 310 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 OR4K15Q8NH41 348 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 ZNF775Q96BV0 537 aaPredicted RBP14.4□□□□□ -0.1
SHQ1-201ENST00000325599 GPER1Q99527 375 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 OR51M1Q9H341 326 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 MOB1AQ9H8S9 216 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 PTRH2Q9Y3E5 179 aaKnown RBP14.4□□□□□ -0.1
SHQ1-201ENST00000325599 F5H5K5 113 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 EFSO43281 561 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 IFNA6P05013 189 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 CFIP05156 583 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 SMIM6P0DI80 62 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 AKR1C2P52895 323 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 AKR1C1Q04828 323 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 MICBQ29980 383 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 MR1Q95460 341 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 RAB3CQ96E17 227 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 LYZL4Q96KX0 146 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 TSNAXQ99598 290 aaKnown RBP14.4□□□□□ -0.1
SHQ1-201ENST00000325599 TAS2R3Q9NYW6 316 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 PILRBQ9UKJ0 227 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 OR5H15A6NDH6 313 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 TP53I11O14683 189 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 TXNL1O43396 289 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 CRTAPO75718 401 aaPredicted RBP14.4□□□□□ -0.1
SHQ1-201ENST00000325599 S100PP25815 95 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 SLC35A1P78382 337 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 C11orf87Q6NUJ2 197 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 GLYATL2Q8WU03 294 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 SLC25A43Q8WUT9 341 aaPredicted RBP14.4□□□□□ -0.1
SHQ1-201ENST00000325599 ARHGAP5-AS1Q96IT6 56 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 PROK2Q9HC23 129 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 IGHV1-45A0A0A0MS14 117 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 PATE3B3GLJ2 98 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 IGHV2-70P01814 119 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 CD63P08962 238 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 H2AFB1P0C5Y9 115 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 RAET1LQ5VY80 246 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 CYB5R2Q6BCY4 276 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 LDLRAD3Q86YD5 345 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 DTWD2Q8NBA8 298 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 MAFAQ8NHW3 353 aaPredicted RBP14.39□□□□□ -0.11
SHQ1-201ENST00000325599 MITD1Q8WV92 249 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 ZNF75AQ96N20 296 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 TMEM59Q9BXS4 323 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 FBLN5Q9UBX5 448 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 EEF1E1-BLOC1S5C9J1V9 151 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 IL2RAP01589 272 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 ADH6P28332 368 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 H3F3AP84243 136 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 SNTB1Q13884 538 aaKnown RBP14.39□□□□□ -0.11
SHQ1-201ENST00000325599 KCNMB1Q16558 191 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 JMJD6Q6NYC1 403 aaPredicted RBP14.39□□□□□ -0.11
SHQ1-201ENST00000325599 PGAP1Q75T13 922 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 ZDHHC22Q8N966 263 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 OR14K1Q8NGZ2 314 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 ASB13Q8WXK3 278 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 PFDN5Q99471 154 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 PRR13Q9NZ81 148 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 COMMD9Q9P000 198 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 GHRLQ9UBU3 117 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 TNFSF18Q9UNG2 199 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 CELSR3Q9NYQ7 3312 aa14.39□□□□□ -0.11
SHQ1-201ENST00000325599 FGF5P12034 268 aa14.38□□□□□ -0.11
SHQ1-201ENST00000325599 PI3P19957 117 aa14.38□□□□□ -0.11
SHQ1-201ENST00000325599 MPZP25189 248 aa14.38□□□□□ -0.11
SHQ1-201ENST00000325599 SLC6A9P48067 706 aa14.38□□□□□ -0.11
SHQ1-201ENST00000325599 SRSF4Q08170 494 aaKnown RBP14.38□□□□□ -0.11
SHQ1-201ENST00000325599 PMS2CLQ68D20 193 aa14.38□□□□□ -0.11
SHQ1-201ENST00000325599 CRIP3Q6Q6R5 217 aa14.38□□□□□ -0.11
SHQ1-201ENST00000325599 PUSL1Q8N0Z8 303 aaKnown RBP14.38□□□□□ -0.11
SHQ1-201ENST00000325599 GTPBP8Q8N3Z3 284 aaPredicted RBP14.38□□□□□ -0.11
SHQ1-201ENST00000325599 OR10K1Q8NGX5 313 aa14.38□□□□□ -0.11
SHQ1-201ENST00000325599 KCNG3Q8TAE7 436 aa14.38□□□□□ -0.11
SHQ1-201ENST00000325599 ZNF837Q96EG3 531 aaPredicted RBP14.38□□□□□ -0.11
SHQ1-201ENST00000325599 PGAM5Q96HS1 289 aa14.38□□□□□ -0.11
SHQ1-201ENST00000325599 VRK1Q99986 396 aaPredicted RBP14.38□□□□□ -0.11
SHQ1-201ENST00000325599 RNF222A6NCQ9 220 aa14.38□□□□□ -0.11
SHQ1-201ENST00000325599 KLF7O75840 302 aaPredicted RBP14.38□□□□□ -0.11
SHQ1-201ENST00000325599 COX6A1P12074 109 aa14.38□□□□□ -0.11
SHQ1-201ENST00000325599 HIST1H1DP16402 221 aaKnown RBP14.38□□□□□ -0.11
SHQ1-201ENST00000325599 CCL1P22362 96 aa14.38□□□□□ -0.11
SHQ1-201ENST00000325599 CSNK1A1P48729 337 aa14.38□□□□□ -0.11
SHQ1-201ENST00000325599 NPY4RP50391 375 aa14.38□□□□□ -0.11
SHQ1-201ENST00000325599 ZNF239Q16600 458 aaKnown RBP14.38□□□□□ -0.11
SHQ1-201ENST00000325599 DOK3Q7L591 496 aa14.38□□□□□ -0.11
SHQ1-201ENST00000325599 IMMP1LQ96LU5 166 aa14.38□□□□□ -0.11
SHQ1-201ENST00000325599 PHB2Q99623 299 aa14.38□□□□□ -0.11
SHQ1-201ENST00000325599 LOC102723996A0A087X1L8 192 aa14.37□□□□□ -0.11
SHQ1-201ENST00000325599 ZIC3O60481 467 aa14.37□□□□□ -0.11
SHQ1-201ENST00000325599 CHRM2P08172 466 aa14.37□□□□□ -0.11
SHQ1-201ENST00000325599 DBHP09172 617 aa14.37□□□□□ -0.11
SHQ1-201ENST00000325599 MGMTP16455 207 aa14.37□□□□□ -0.11
SHQ1-201ENST00000325599 AGTR1P30556 359 aa14.37□□□□□ -0.11
SHQ1-201ENST00000325599 GPX4P36969 197 aaPredicted RBP14.37□□□□□ -0.11
SHQ1-201ENST00000325599 LUMP51884 338 aaPredicted RBP14.37□□□□□ -0.11
SHQ1-201ENST00000325599 ENDOGQ14249 297 aaKnown RBP14.37□□□□□ -0.11
SHQ1-201ENST00000325599 RSPO1Q2MKA7 263 aaPredicted RBP14.37□□□□□ -0.11
SHQ1-201ENST00000325599 ACER2Q5QJU3 275 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms