RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ACY1Q03154 408 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 SMAD4Q13485 552 aaKnown RBP11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 FNDC9Q8TBE3 224 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 OR10C1Q96KK4 312 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 MYOTQ9UBF9 498 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 M0R036 132 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 SLC25A4P12235 298 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 TMEM50BP56557 158 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 RSU1Q15404 277 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 ANKRD55Q3KP44 614 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 PGAP1Q75T13 922 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 CPEB2Q7Z5Q1 589 aaKnown RBP11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 MRGPRX4Q96LA9 322 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 ULBP2Q9BZM5 246 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 XRCC2O43543 280 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 DIRAS3O95661 229 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 CALCRP30988 508 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 RRADP55042 308 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 GPR85P60893 370 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 IKZF1Q13422 519 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 ZNF345Q14585 488 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 DOK3Q7L591 496 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 DYRK2Q92630 601 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 MRGPRFQ96AM1 343 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 UCN2Q96RP3 112 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 C20orf24Q9BUV8 137 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 EDEM2Q9BV94 578 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 TLNRD1Q9H1K6 362 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 FN3KRPQ9HA64 309 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 MRPS17Q9Y2R5 130 aaKnown RBP11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 DOCK7Q96N67 2140 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 H0YIZ8 118 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 K7EPK0 472 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 MTRF1O75570 445 aaKnown RBP11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 TRAPPC6AO75865 159 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 GSTP1P09211 210 aaKnown RBP11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 PET100P0DJ07 73 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 SRFP11831 508 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 NFYBP25208 207 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 PLPPR5Q32ZL2 321 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 TSPO2Q5TGU0 170 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 MEX3BQ6ZN04 569 aaKnown RBP11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 PPP1R3BQ86XI6 285 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 SGPP2Q8IWX5 399 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 IQCF2Q8IXL9 164 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 OR5AS1Q8N127 324 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 FAM71E2Q8N5Q1 922 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 NEK7Q8TDX7 302 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 TAF9BQ9HBM6 251 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 B3GAT1Q9P2W7 334 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 NXT1Q9UKK6 140 aaKnown RBP11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 LHX6Q9UPM6 363 aa11.37□□□□□ -0.59
HMGCS1-201ENST00000325110 TTLL8A6PVC2 850 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 TP53I11O14683 189 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 SFT2D2O95562 160 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 IGHV3-9P01782 118 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 PTGFRP43088 359 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 RIPPLY1Q0D2K3 151 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 RHBDD2Q6NTF9 364 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 HOGA1Q86XE5 327 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 OR13G1Q8NGZ3 307 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 OIT3Q8WWZ8 545 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 ASB13Q8WXK3 278 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 RP1L1Q8IWN7 2480 aaPredicted RBP11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 GPR179Q6PRD1 2367 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 TMEM14DPA8MWL7 114 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 SRSF10O75494 262 aaKnown RBP11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 SPINK2P20155 84 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 PDZK1IP1Q13113 114 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 C9orf135Q5VTT2 229 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 EIF5AL1Q6IS14 154 aaKnown RBP11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 ARRDC1Q8N5I2 433 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 PLPP5Q8NEB5 264 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 UCK1Q9HA47 277 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 C19orf25Q9UFG5 118 aaPredicted RBP11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 PTRH2Q9Y3E5 179 aaKnown RBP11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 PCDHGA1Q9Y5H4 931 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 TRAF3IP2O43734 574 aaPredicted RBP11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 IGHMP01871 453 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 CBR1P16152 277 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 ASCL1P50553 236 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 OGFOD3Q6PK18 319 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 LDLRAD3Q86YD5 345 aa11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 ZNF385AQ96PM9 386 aaKnown RBP11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 EIF5A2Q9GZV4 153 aaKnown RBP11.36□□□□□ -0.59
HMGCS1-201ENST00000325110 NCOA6Q14686 2063 aaPredicted RBP11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 SHISA7A6NL88 538 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 M0R135 149 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 ADAM10O14672 748 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 PGA4P0DJD7 388 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 PGA3P0DJD8 388 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 ADH6P28332 368 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 NPBWR1P48145 328 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 TAS2R46P59540 309 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 CDCP2Q5VXM1 449 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 OR2A2Q6IF42 318 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 SEMA6DQ8NFY4 1073 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 PTX4Q96A99 478 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 ZNF799Q96GE5 643 aa11.35□□□□□ -0.59
HMGCS1-201ENST00000325110 OXGR1Q96P68 337 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms