RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	RPS4Y1	P22090	263 aa	Known RBP	10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	KIR3DL2	P43630	455 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	TAS2R46	P59540	309 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	CYCS	P99999	105 aa	Known RBP	10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	DYRK1A	Q13627	763 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	GPR157	Q5UAW9	335 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	SLC22A25	Q6T423	547 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	SLAMF9	Q96A28	289 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	ST6GAL2	Q96JF0	529 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	NELFA	Q9H3P2	528 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	PPP1R3E	Q9H7J1	279 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	NME2	P22392	152 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	S100A11	P31949	105 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	SERPINF1	P36955	418 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	CAMLG	P49069	296 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	TAS2R31	P59538	309 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	RPS4X	P62701	263 aa	Known RBP	10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	TRA2A	Q13595	282 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	OR2T2	Q6IF00	324 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	SPAG16	Q8N0X2	631 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	APCDD1L	Q8NCL9	501 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	ZBTB44	Q8NCP5	570 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	OR1F12	Q8NHA8	337 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	EMG1	Q92979	244 aa	Known RBP	10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	MUCL1	Q96DR8	90 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	ADAT3	Q96EY9	351 aa	Predicted RBP	10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	PGLYRP3	Q96LB9	341 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	KCNJ15	Q99712	375 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	NPAP1	Q9NZP6	1156 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771	IL17B	Q9UHF5	180 aa		10.49	□□□□□ -0.73
DDR1-223	ENST00000324771		A0A1W2PQD3	144 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	SIRPB1	O00241	398 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	HSD17B6	O14756	317 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	ADH6	P28332	368 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	MEOX1	P50221	254 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	GPM6A	P51674	278 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	EDDM3B	P56851	147 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	ACSM1	Q08AH1	577 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	SSPN	Q14714	243 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	TUSC5	Q8IXB3	177 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	CARF	Q8N187	725 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	GALNT16	Q8N428	558 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	FAAP24	Q9BTP7	215 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	GLS2	Q9UI32	602 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	MN1	Q10571	1320 aa	Predicted RBP	10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	FAM208B	Q5VWN6	2430 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	HELZ	P42694	1942 aa	Known RBP	10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	SLC22A20	A6NK97	555 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	SOCS1	O15524	211 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	PLPPR5	Q32ZL2	321 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	PAN3	Q58A45	887 aa	Known RBP	10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	OR52H1	Q8NGJ2	320 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	KISS1R	Q969F8	398 aa	Predicted RBP	10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	B3GNT2	Q9NY97	397 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	ELF5	Q9UKW6	265 aa	Predicted RBP	10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	TRGV5	A0A0B4J1U4	118 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	VSTM5	A8MXK1	200 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	PMS2P2	O95744	297 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	FKBP2	P26885	142 aa	Known RBP	10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	USF2	Q15853	346 aa	Predicted RBP	10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	TOR2A	Q5JU69	321 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	NLRC3	Q7RTR2	1065 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	OR56B2P	Q8NGI1	322 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	SLX1A	Q9BQ83	275 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	MRPL22	Q9NWU5	206 aa	Known RBP	10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	WASF3	Q9UPY6	502 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	TMEM265	A0A087WTH1	108 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	WDR1	O75083	606 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	UPK3A	O75631	287 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	OR5H8	P0DN80	308 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	PMP22	Q01453	160 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	IFITM2	Q01629	132 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	AADACL3	Q5VUY0	350 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	CCDC71L	Q8N9Z2	235 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	OR4D10	Q8NGI6	311 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	SCGB1C1	Q8TD33	95 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	FAM173A	Q9BQD7	235 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	ADAM19	Q9H013	955 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771	BCO1	Q9HAY6	547 aa		10.48	□□□□□ -0.73
DDR1-223	ENST00000324771		A0A087WZY1	265 aa		10.47	□□□□□ -0.73
DDR1-223	ENST00000324771	ZNF732	B4DXR9	585 aa		10.47	□□□□□ -0.73
DDR1-223	ENST00000324771		F8W036	122 aa		10.47	□□□□□ -0.73
DDR1-223	ENST00000324771	ANKRD34C	P0C6C1	535 aa		10.47	□□□□□ -0.73
DDR1-223	ENST00000324771	RAC2	P15153	192 aa		10.47	□□□□□ -0.73
DDR1-223	ENST00000324771	M6PR	P20645	277 aa		10.47	□□□□□ -0.73
DDR1-223	ENST00000324771	SLC6A1	P30531	599 aa		10.47	□□□□□ -0.73
DDR1-223	ENST00000324771	FCGR2C	P31995	323 aa		10.47	□□□□□ -0.73
DDR1-223	ENST00000324771	CD96	P40200	585 aa		10.47	□□□□□ -0.73
DDR1-223	ENST00000324771	BLOC1S1	P78537	153 aa		10.47	□□□□□ -0.73
DDR1-223	ENST00000324771	ISX	Q2M1V0	245 aa		10.47	□□□□□ -0.73
DDR1-223	ENST00000324771	LINC01590	Q5TEZ4	76 aa		10.47	□□□□□ -0.73
DDR1-223	ENST00000324771	MUC20	Q8N307	709 aa	Predicted RBP	10.47	□□□□□ -0.73
DDR1-223	ENST00000324771	ZC3H10	Q96K80	434 aa	Known RBP	10.47	□□□□□ -0.73
DDR1-223	ENST00000324771	MARVELD1	Q9BSK0	173 aa		10.47	□□□□□ -0.73
DDR1-223	ENST00000324771	SLCO5A1	Q9H2Y9	848 aa		10.47	□□□□□ -0.73
DDR1-223	ENST00000324771	MTFP1	Q9UDX5	166 aa		10.47	□□□□□ -0.73
DDR1-223	ENST00000324771	SLC23A1	Q9UHI7	598 aa		10.47	□□□□□ -0.73
DDR1-223	ENST00000324771	PLXND1	Q9Y4D7	1925 aa		10.47	□□□□□ -0.73
DDR1-223	ENST00000324771	OR5H14	A6NHG9	310 aa		10.47	□□□□□ -0.73
DDR1-223	ENST00000324771	KLF4	O43474	513 aa		10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms