RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 YIF1BQ5BJH7 314 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 PDSS1Q5T2R2 415 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 ZNF627Q7L945 461 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 BCDIN3DQ7Z5W3 292 aaKnown RBP5.55□□□□□ -1.52
CSTF3-201ENST00000323959 WDFY1Q8IWB7 410 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 C17orf78Q8N4C9 275 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 ZNF433Q8N7K0 673 aaPredicted RBP5.55□□□□□ -1.52
CSTF3-201ENST00000323959 TMEM99Q8N816 258 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 GATSQ8NAP1 163 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 OTOSQ8NHW6 89 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 SPRYD4Q8WW59 207 aaPredicted RBP5.55□□□□□ -1.52
CSTF3-201ENST00000323959 SH3YL1Q96HL8 342 aaPredicted RBP5.55□□□□□ -1.52
CSTF3-201ENST00000323959 KCTD7Q96MP8 289 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 CDADC1Q9BWV3 514 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 MMP28Q9H239 520 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 HMG20AQ9NP66 347 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 AMBNQ9NP70 447 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 MMP26Q9NRE1 261 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 MRPL15Q9P015 296 aaKnown RBP5.55□□□□□ -1.52
CSTF3-201ENST00000323959 MED11Q9P086 117 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 TMA7Q9Y2S6 64 aaKnown RBP5.55□□□□□ -1.52
CSTF3-201ENST00000323959 TRBV5-5A0A0J9YX44 114 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 A0A1W2PQL4 384 aaPredicted RBP5.55□□□□□ -1.52
CSTF3-201ENST00000323959 ISPDA4D126 451 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 ZNF814B7Z6K7 855 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 LYZL6O75951 148 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 ISG15P05161 165 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 PGA4P0DJD7 388 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 PGA3P0DJD8 388 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 M6PRP20645 277 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 RCVRNP35243 200 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 RPL4P36578 427 aaKnown RBP5.55□□□□□ -1.52
CSTF3-201ENST00000323959 CCR4P51679 360 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 RAC3P60763 192 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 ERVK-25P63136 954 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 CD300CQ08708 224 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 RBMY1FQ15415 496 aaKnown RBP5.55□□□□□ -1.52
CSTF3-201ENST00000323959 HFEQ30201 348 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 SLC25A47Q6Q0C1 308 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 ESPNLQ6ZVH7 1005 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 KRT74Q7RTS7 529 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 CCDC190Q86UF4 302 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 IGFN1Q86VF2 1251 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 LINC00482Q8N8I6 264 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 DTX3Q8N9I9 347 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 OR51G2Q8NGK0 314 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 ZNF417Q8TAU3 575 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 NDNFQ8TB73 568 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 AP3S1Q92572 193 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 Q96M85 177 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 ZNF587Q96SQ5 575 aaPredicted RBP5.55□□□□□ -1.52
CSTF3-201ENST00000323959 NMNAT3Q96T66 252 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 SOSTQ9BQB4 213 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 MEGF9Q9H1U4 602 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 EDA2RQ9HAV5 297 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 GALNT9Q9HCQ5 603 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 CA10Q9NS85 328 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 ZNF275Q9NSD4 429 aaPredicted RBP5.55□□□□□ -1.52
CSTF3-201ENST00000323959 PURGQ9UJV8 347 aaKnown RBP5.55□□□□□ -1.52
CSTF3-201ENST00000323959 FBXL2Q9UKC9 423 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 CLDN25C9JDP6 229 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 J3QRK9 145 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 XKRYO14609 159 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 UPK3AO75631 287 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 RP2O75695 350 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 UCHL1P09936 223 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 PRKACBP22694 351 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 EVX1P49640 407 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 RORCP51449 518 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 GBX2P52951 348 aaPredicted RBP5.55□□□□□ -1.52
CSTF3-201ENST00000323959 LSM6P62312 80 aaKnown RBP5.55□□□□□ -1.52
CSTF3-201ENST00000323959 KRTAP27-1Q3LI81 207 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 C3orf36Q3SXR2 165 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 DHRS7BQ6IAN0 325 aaPredicted RBP5.55□□□□□ -1.52
CSTF3-201ENST00000323959 TMEM91Q6ZNR0 172 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 GGNQ86UU5 652 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 OR6V1Q8N148 313 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 ATP6V1C2Q8NEY4 427 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 NOXO1Q8NFA2 376 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 NUP37Q8NFH4 326 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 SLC26A10Q8NG04 563 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 OR4K13Q8NH42 304 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 TSEN15Q8WW01 171 aaKnown RBP5.55□□□□□ -1.52
CSTF3-201ENST00000323959 UPRTQ96BW1 309 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 RASD2Q96D21 266 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 ZNF486Q96H40 463 aaPredicted RBP5.55□□□□□ -1.52
CSTF3-201ENST00000323959 INTS14Q96SY0 518 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 CCDC32Q9BV29 185 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 LINC00470Q9BZP3 86 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 OR51E2Q9H255 320 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 NIPAL2Q9H841 368 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 MOB1AQ9H8S9 216 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 ATPIF1Q9UII2 106 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 ADAM18Q9Y3Q7 739 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 INSIG2Q9Y5U4 225 aa5.55□□□□□ -1.52
CSTF3-201ENST00000323959 ZNF816-ZNF321PA0A0X1KG74 233 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 PNMA8CA0A1B0GUJ8 204 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 OR6C65A6NJZ3 312 aa5.54□□□□□ -1.52
CSTF3-201ENST00000323959 KHDRBS3O75525 346 aaKnown RBP5.54□□□□□ -1.52
CSTF3-201ENST00000323959 CRYZL1O95825 349 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms