RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 TREM2Q9NZC2 230 aa8.85□□□□□ -0.99
COL12A1-201ENST00000322507 GNG12Q9UBI6 72 aa8.85□□□□□ -0.99
COL12A1-201ENST00000322507 SOX4Q06945 474 aaPredicted RBP8.85□□□□□ -0.99
COL12A1-201ENST00000322507 IL10RAQ13651 578 aa8.85□□□□□ -0.99
COL12A1-201ENST00000322507 OR5M9Q8NGP3 310 aa8.85□□□□□ -0.99
COL12A1-201ENST00000322507 TNRC6AQ8NDV7 1962 aaKnown RBP8.85□□□□□ -0.99
COL12A1-201ENST00000322507 HIST1H1EP10412 219 aaKnown RBP8.85□□□□□ -0.99
COL12A1-201ENST00000322507 CXCL12P48061 93 aa8.85□□□□□ -0.99
COL12A1-201ENST00000322507 WNT7BP56706 349 aa8.85□□□□□ -0.99
COL12A1-201ENST00000322507 TPBGQ13641 420 aa8.85□□□□□ -0.99
COL12A1-201ENST00000322507 DNLZQ5SXM8 178 aa8.85□□□□□ -0.99
COL12A1-201ENST00000322507 SDR9C7Q8NEX9 313 aa8.85□□□□□ -0.99
COL12A1-201ENST00000322507 OR10J5Q8NHC4 309 aa8.85□□□□□ -0.99
COL12A1-201ENST00000322507 IL1F10Q8WWZ1 152 aa8.85□□□□□ -0.99
COL12A1-201ENST00000322507 ZDHHC8Q9ULC8 765 aa8.85□□□□□ -0.99
COL12A1-201ENST00000322507 PTRH2Q9Y3E5 179 aaKnown RBP8.85□□□□□ -0.99
COL12A1-201ENST00000322507 CYB561A3Q8NBI2 242 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 PCNPQ8WW12 178 aaKnown RBP8.84□□□□□ -0.99
COL12A1-201ENST00000322507 TAAR2Q9P1P5 351 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 SOX15O60248 233 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 GLCEO94923 617 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 HTR5AP47898 357 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 UBE2V2Q15819 145 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 TFAP2EQ6VUC0 442 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 CLEC14AQ86T13 490 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 RNF175Q8N4F7 328 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 NUDCD2Q8WVJ2 157 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 CHODLQ9H9P2 273 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 HRASLSQ9HDD0 168 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 NAT8Q9UHE5 227 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 FANCMQ8IYD8 2048 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 ZNF354AO60765 605 aaPredicted RBP8.84□□□□□ -0.99
COL12A1-201ENST00000322507 GDF1P27539 372 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 RACK1P63244 317 aaKnown RBP8.84□□□□□ -0.99
COL12A1-201ENST00000322507 TMEM249Q2WGJ8 235 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 DPPA3Q6W0C5 159 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 RBM45Q8IUH3 476 aaKnown RBP8.84□□□□□ -0.99
COL12A1-201ENST00000322507 VN1R2Q8NFZ6 395 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 LINC01387J3KSC0 135 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 TNFRSF10CO14798 259 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 LYZL6O75951 148 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 OR7C1O76099 320 aaPredicted RBP8.84□□□□□ -0.99
COL12A1-201ENST00000322507 GPR3P46089 330 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 SRSF5Q13243 272 aaKnown RBP8.84□□□□□ -0.99
COL12A1-201ENST00000322507 ZDHHC22Q8N966 263 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 MVB12AQ96EY5 273 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 GABRG3Q99928 467 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 TMEM43Q9BTV4 400 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 C19orf67A6NJJ6 358 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 OR2J3O76001 311 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 FAM26DQ5JW98 314 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 CST9Q5W186 159 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 DOLPP1Q86YN1 238 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 TMEM217Q8N7C4 229 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 OR10W1Q8NGF6 305 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 TRPM3Q9HCF6 1732 aaPredicted RBP8.84□□□□□ -0.99
COL12A1-201ENST00000322507 GPX2P18283 190 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 SRP14P37108 136 aaKnown RBP8.84□□□□□ -0.99
COL12A1-201ENST00000322507 MFAP5Q13361 173 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 RNFT1Q5M7Z0 435 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 TMEM268Q5VZI3 342 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 ZNF385CQ66K41 422 aaPredicted RBP8.84□□□□□ -0.99
COL12A1-201ENST00000322507 NCKAP5O14513 1909 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 LIMS3P0CW19 117 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 LIMS4P0CW20 117 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 EPXP11678 715 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 ELAVL4P26378 380 aaKnown RBP8.84□□□□□ -0.99
COL12A1-201ENST00000322507 TMED6Q8WW62 240 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 FYTTD1Q96QD9 318 aaKnown RBP8.84□□□□□ -0.99
COL12A1-201ENST00000322507 FKRPQ9H9S5 495 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 IL4P05112 153 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 ACHEP22303 614 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 POLR2GP62487 172 aaKnown RBP eCLIP8.84□□□□□ -0.99
COL12A1-201ENST00000322507 DOK3Q7L591 496 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 ABHD4Q8TB40 342 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 PTP4A1Q93096 173 aa8.84□□□□□ -0.99
COL12A1-201ENST00000322507 ZNF593O00488 134 aaPredicted RBP8.84□□□□□ -1
COL12A1-201ENST00000322507 TIMD4Q96H15 378 aa8.84□□□□□ -1
COL12A1-201ENST00000322507 DLL4Q9NR61 685 aa8.84□□□□□ -1
COL12A1-201ENST00000322507 EP300Q09472 2414 aaPredicted RBP8.84□□□□□ -1
COL12A1-201ENST00000322507 ZNF865P0CJ78 1059 aaPredicted RBP8.83□□□□□ -1
COL12A1-201ENST00000322507 ST6GAL1P15907 406 aa8.83□□□□□ -1
COL12A1-201ENST00000322507 ELLP55199 621 aaPredicted RBP8.83□□□□□ -1
COL12A1-201ENST00000322507 SEH1LQ96EE3 360 aa8.83□□□□□ -1
COL12A1-201ENST00000322507 TMEM101Q96IK0 257 aa8.83□□□□□ -1
COL12A1-201ENST00000322507 RSPO3Q9BXY4 272 aaPredicted RBP8.83□□□□□ -1
COL12A1-201ENST00000322507 ALX4Q9H161 411 aaPredicted RBP8.83□□□□□ -1
COL12A1-201ENST00000322507 NDUFB11Q9NX14 153 aa8.83□□□□□ -1
COL12A1-201ENST00000322507 TRAV27A0A087WT01 109 aa8.83□□□□□ -1
COL12A1-201ENST00000322507 CBX7O95931 251 aa8.83□□□□□ -1
COL12A1-201ENST00000322507 SLC35E1Q96K37 410 aa8.83□□□□□ -1
COL12A1-201ENST00000322507 ZNF385DQ9H6B1 395 aa8.83□□□□□ -1
COL12A1-201ENST00000322507 VDAC3Q9Y277 283 aa8.83□□□□□ -1
COL12A1-201ENST00000322507 COL22A1Q8NFW1 1626 aaPredicted RBP8.83□□□□□ -1
COL12A1-201ENST00000322507 I6L893 689 aaPredicted RBP8.83□□□□□ -1
COL12A1-201ENST00000322507 C21orf33P30042 268 aaPredicted RBP8.83□□□□□ -1
COL12A1-201ENST00000322507 ZNF816Q0VGE8 651 aaPredicted RBP8.83□□□□□ -1
COL12A1-201ENST00000322507 OR51A4Q8NGJ6 313 aa8.83□□□□□ -1
COL12A1-201ENST00000322507 PAPLNO95428 1278 aa8.83□□□□□ -1
COL12A1-201ENST00000322507 C6orf132Q5T0Z8 1188 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms