RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 SPNP16150 400 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 FUT6P51993 359 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 MORN1Q5T089 497 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 DND1Q8IYX4 353 aaKnown RBP15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 ZADH2Q8N4Q0 377 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 RDH5Q92781 318 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 OXGR1Q96P68 337 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 FGF21Q9NSA1 209 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 ZNF749O43361 778 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 MEOX1P50221 254 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 ELFN2Q5R3F8 820 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 RIMKLAQ8IXN7 391 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 FKBP11Q9NYL4 201 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 ZNF816Q0VGE8 651 aaPredicted RBP15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 FZD2Q14332 565 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 OR2G2Q8NGZ5 317 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 ANAPC16Q96DE5 110 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 NEIL1Q96FI4 390 aaPredicted RBP15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 SH2D7A6NKC9 451 aaPredicted RBP15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 CLDN34H7C241 214 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 SCMH1Q96GD3 660 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 RBBP6Q7Z6E9 1792 aaKnown RBP15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 LPAL2Q16609 132 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 LINC00696Q6ZRV3 163 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 TMEM230Q96A57 120 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 OR1A1Q9P1Q5 309 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 RAG2P55895 527 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 EXTL1Q92935 676 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 ZNF737O75373 536 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 TGFBR1P36897 503 aa15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 RPL29P47914 159 aaKnown RBP15.25■□□□□ 0.03
SMCHD1-201ENST00000320876 AREGP15514 252 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 TMEM267Q0VDI3 215 aaPredicted RBP15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 LRP11Q86VZ4 500 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 PP6455Q8WZ26 134 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 SPACA5Q96QH8 159 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 RAB40CQ96S21 281 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 HES4Q9HCC6 221 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 CYSLTR2Q9NS75 346 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 NUMBLQ9Y6R0 609 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 OR52N5Q8NH56 324 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 GPANK1O95872 356 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 HSF5Q4G112 596 aaPredicted RBP15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 Q8IYB0 196 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 OR6S1Q8NH40 331 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 DAPP1Q9UN19 280 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 IGLV3-10A0A075B6K4 115 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 PSMB2P49721 201 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 PNRC1Q12796 327 aaPredicted RBP15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 CTF1Q16619 201 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 MYPOPQ86VE0 399 aaPredicted RBP15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 ZNF296Q8WUU4 475 aaPredicted RBP15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 HS3ST3A1Q9Y663 406 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 IGHV3-9P01782 118 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 RPLP1P05386 114 aaKnown RBP15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 KIR2DS2P43631 304 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 DERL3Q96Q80 235 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 TRGV10A0A0A0MS01 117 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 DUXBA0A1W2PPF3 345 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 HRO43593 1189 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 ANKRD34CP0C6C1 535 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 PMP22Q01453 160 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 ADAT1Q9BUB4 502 aaKnown RBP15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 ZNF426Q9BUY5 554 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 CHST6Q9GZX3 395 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 ANKRD10Q9NXR5 420 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 HTR1DP28221 377 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 FAM3AP98173 230 aa15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 MRPL43Q8N983 215 aaKnown RBP15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 DHCR7Q9UBM7 475 aaKnown RBP15.24■□□□□ 0.03
SMCHD1-201ENST00000320876 M0QZ24 198 aa15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 MAP1LC3CQ9BXW4 147 aa15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 TRAV34A0A0B4J273 112 aa15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 ICOSLGO75144 302 aa15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 GJA4P35212 333 aa15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 H0YIG0 161 aa15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 PRSS3P2Q8NHM4 247 aa15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 ATG101Q9BSB4 218 aa15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 NDUFB6O95139 128 aa15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 ZBTB25P24278 435 aa15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 BTG2P78543 158 aa15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 TMEM207Q6UWW9 146 aa15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 EDEM2Q9BV94 578 aa15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 GATCO43716 136 aaKnown RBP15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 SHBQ15464 509 aa15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 TTC9Q92623 222 aa15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 SLC25A37Q9NYZ2 338 aa15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 M0R1X1 148 aa15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 OR8D4Q8NGM9 314 aa15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 KMT2EQ8IZD2 1858 aa15.23■□□□□ 0.03
SMCHD1-201ENST00000320876 SDHBP21912 280 aa15.22■□□□□ 0.03
SMCHD1-201ENST00000320876 HLXQ14774 488 aaPredicted RBP15.22■□□□□ 0.03
SMCHD1-201ENST00000320876 SLC25A35Q3KQZ1 300 aa15.22■□□□□ 0.03
SMCHD1-201ENST00000320876 ACY3Q96HD9 319 aa15.22■□□□□ 0.03
SMCHD1-201ENST00000320876 RNF186Q9NXI6 227 aa15.22■□□□□ 0.03
SMCHD1-201ENST00000320876 SLC45A2Q9UMX9 530 aa15.22■□□□□ 0.03
SMCHD1-201ENST00000320876 MRGPRX4Q96LA9 322 aa15.22■□□□□ 0.03
SMCHD1-201ENST00000320876 DNAJC25-GNG10A0A024R161 153 aa15.22■□□□□ 0.03
SMCHD1-201ENST00000320876 M0R2Z0 102 aa15.22■□□□□ 0.03
SMCHD1-201ENST00000320876 CST7O76096 145 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms