RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 C16orf47Q6ZP98 133 aaPredicted RBP14.18□□□□□ -0.14
CRAT-201ENST00000318080 APCDD1LQ8NCL9 501 aa14.18□□□□□ -0.14
CRAT-201ENST00000318080 CCDC54Q8NEL0 328 aa14.18□□□□□ -0.14
CRAT-201ENST00000318080 THRSPQ92748 146 aa14.18□□□□□ -0.14
CRAT-201ENST00000318080 TGIF2Q9GZN2 237 aa14.18□□□□□ -0.14
CRAT-201ENST00000318080 EIF5A2Q9GZV4 153 aaKnown RBP14.18□□□□□ -0.14
CRAT-201ENST00000318080 C5orf66Q9H5L9 145 aa14.18□□□□□ -0.14
CRAT-201ENST00000318080 LANCL2Q9NS86 450 aa14.18□□□□□ -0.14
CRAT-201ENST00000318080 MED29Q9NX70 200 aa14.18□□□□□ -0.14
CRAT-201ENST00000318080 RCL1Q9Y2P8 373 aaKnown RBP14.18□□□□□ -0.14
CRAT-201ENST00000318080 MRPS17Q9Y2R5 130 aaKnown RBP14.18□□□□□ -0.14
CRAT-201ENST00000318080 FBXO7Q9Y3I1 522 aa14.18□□□□□ -0.14
CRAT-201ENST00000318080 SPAG17Q6Q759 2223 aa14.18□□□□□ -0.14
CRAT-201ENST00000318080 HTR5AP47898 357 aa14.18□□□□□ -0.14
CRAT-201ENST00000318080 ACY1Q03154 408 aa14.18□□□□□ -0.14
CRAT-201ENST00000318080 C1orf140Q5VVS0 124 aa14.18□□□□□ -0.14
CRAT-201ENST00000318080 ZDHHC22Q8N966 263 aa14.18□□□□□ -0.14
CRAT-201ENST00000318080 SLC26A10Q8NG04 563 aa14.18□□□□□ -0.14
CRAT-201ENST00000318080 TOLLIPQ9H0E2 274 aa14.18□□□□□ -0.14
CRAT-201ENST00000318080 DUSP15Q9H1R2 295 aaPredicted RBP14.18□□□□□ -0.14
CRAT-201ENST00000318080 RAB22AQ9UL26 194 aa14.18□□□□□ -0.14
CRAT-201ENST00000318080 SIT1Q9Y3P8 196 aa14.18□□□□□ -0.14
CRAT-201ENST00000318080 TIMM10BQ9Y5J6 103 aa14.18□□□□□ -0.14
CRAT-201ENST00000318080 KIR2DS5A0A0G2JLQ3 304 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 A0A0G2JNG1 304 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 KIR2DS3K7RE56 304 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 IFNA2P01563 188 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 GLRA1P23415 457 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 ITGA3P26006 1051 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 AKT2P31751 481 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 SPEM2Q0P670 501 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 KIR2DS5Q14953 304 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 MIDNQ504T8 468 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 ACTBL2Q562R1 376 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 OCSTAMPQ9BR26 566 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 PPP1R14DQ9NXH3 145 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 URGCP-MRPS24S4R325 110 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 MED12Q93074 2177 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 IGHV5-51A0A0C4DH38 117 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 MEGF11A6BM72 1044 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 NPIPB7O75200 414 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 DDAH2O95865 285 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 BCKDHBP21953 392 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 RPS10P46783 165 aaKnown RBP14.17□□□□□ -0.14
CRAT-201ENST00000318080 RAB2AP61019 212 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 PHF19Q5T6S3 580 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 C9orf40Q8IXQ3 194 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 OR4K15Q8NH41 348 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 ZNF721Q8TF20 911 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 C14orf144Q96I85 54 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 SHDQ96IW2 340 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 BANF2Q9H503 90 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 MFNGO00587 321 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 SLC31A2O15432 143 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 SOCS1O15524 211 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 GP1BBP13224 206 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 CTSEP14091 401 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 IL12BP29460 328 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 SULT1A1P50225 295 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 NAAAQ02083 359 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 FZD2Q14332 565 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 PLAC9Q5JTB6 97 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 ZNF343Q6P1L6 599 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 ANGPTL5Q86XS5 388 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 EMC6Q9BV81 110 aa14.17□□□□□ -0.14
CRAT-201ENST00000318080 ZNF107Q9UII5 783 aaPredicted RBP14.17□□□□□ -0.14
CRAT-201ENST00000318080 A0A0A6YYH2 397 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 A6NJ64 397 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 ZNF354AO60765 605 aaPredicted RBP14.16□□□□□ -0.14
CRAT-201ENST00000318080 RAD51DO75771 328 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 ZNF205O95201 554 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 KNG1P01042 644 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 TTRP02766 147 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 ZNF823P16415 610 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 GLP1RP43220 463 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 ASCL1P50553 236 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 SUPT4H1P63272 117 aaKnown RBP14.16□□□□□ -0.14
CRAT-201ENST00000318080 KIAA0141Q14154 515 aaPredicted RBP14.16□□□□□ -0.14
CRAT-201ENST00000318080 ZNF239Q16600 458 aaKnown RBP14.16□□□□□ -0.14
CRAT-201ENST00000318080 KIAA0895LQ68EN5 471 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 HOGA1Q86XE5 327 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 ARRDC1Q8N5I2 433 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 MESP1Q9BRJ9 268 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 TBL1XR1Q9BZK7 514 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 SOHLH2Q9NX45 425 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 PUS1Q9Y606 427 aaKnown RBP eCLIP14.16□□□□□ -0.14
CRAT-201ENST00000318080 CABIN1Q9Y6J0 2220 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 NUDT21O43809 227 aaKnown RBP14.16□□□□□ -0.14
CRAT-201ENST00000318080 SCGB1D2O95969 90 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 IGKV3-11P04433 115 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 SLC2A1P11166 492 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 GABRA4P48169 554 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 DVL1P1P54792 670 aaPredicted RBP14.16□□□□□ -0.14
CRAT-201ENST00000318080 SLC46A1Q96NT5 459 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 WIF1Q9Y5W5 379 aa14.16□□□□□ -0.14
CRAT-201ENST00000318080 LRP4O75096 1905 aa14.15□□□□□ -0.14
CRAT-201ENST00000318080 TRBV6-7A0A0A0MS04 114 aa14.15□□□□□ -0.14
CRAT-201ENST00000318080 FRG2CA6NGY1 282 aa14.15□□□□□ -0.14
CRAT-201ENST00000318080 MS4A18H0YCH9 400 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms