RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 CHST5Q9GZS9 411 aa13.15□□□□□ -0.3
PDLIM5-202ENST00000318007 CLEC4MQ9H2X3 399 aaPredicted RBP13.15□□□□□ -0.3
PDLIM5-202ENST00000318007 ZCCHC4Q9H5U6 513 aa13.15□□□□□ -0.3
PDLIM5-202ENST00000318007 KCNN3Q9UGI6 736 aa13.15□□□□□ -0.3
PDLIM5-202ENST00000318007 SMIM31A0A1B0GVY4 71 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 LOC390937A0A1W2PQ73 354 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 ZSCAN5BA6NJL1 495 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 ANXA2P2A6NMY6 339 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 ADRA2CP18825 462 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 RAB3AP20336 220 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 RPS19P39019 145 aaKnown RBP13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 SELENOVP59797 346 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 CLVS2Q5SYC1 327 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 MUC15Q8N387 334 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 FTMTQ8N4E7 242 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 JAGN1Q8N5M9 183 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 OR1M1Q8NGA1 313 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 OR8S1Q8NH09 359 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 FBXW5Q969U6 566 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 DCSTAMPQ9H295 470 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 OPA3Q9H6K4 179 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 TREM2Q9NZC2 230 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 IQCF6A8MYZ5 107 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 C3orf80F5H4A9 247 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 F5H5P2 479 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 MLNRO43193 412 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 SULT1B1O43704 296 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 ZNF182P17025 639 aaPredicted RBP13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 CLDN12P56749 244 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 HOXA4Q00056 320 aaPredicted RBP13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 ZDHHC23Q8IYP9 409 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 OR8G5Q8NG78 346 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 UBASH3BQ8TF42 649 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 HPSE2Q8WWQ2 592 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 TMEM204Q9BSN7 226 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 FAM192AQ9GZU8 254 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 FGF23Q9GZV9 251 aaPredicted RBP13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 LAMP3Q9UQV4 416 aa13.14□□□□□ -0.31
PDLIM5-202ENST00000318007 A0A0B4J203 849 aa13.13□□□□□ -0.31
PDLIM5-202ENST00000318007 AZGP1P25311 298 aaKnown RBP13.13□□□□□ -0.31
PDLIM5-202ENST00000318007 APOBEC3AP31941 199 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-202ENST00000318007 THBS2P35442 1172 aa13.13□□□□□ -0.31
PDLIM5-202ENST00000318007 GMFBP60983 142 aa13.13□□□□□ -0.31
PDLIM5-202ENST00000318007 OR8G1Q15617 311 aa13.13□□□□□ -0.31
PDLIM5-202ENST00000318007 SPRNQ5BIV9 151 aa13.13□□□□□ -0.31
PDLIM5-202ENST00000318007 HES5Q5TA89 166 aa13.13□□□□□ -0.31
PDLIM5-202ENST00000318007 DDI2Q5TDH0 399 aa13.13□□□□□ -0.31
PDLIM5-202ENST00000318007 ANGPTL5Q86XS5 388 aa13.13□□□□□ -0.31
PDLIM5-202ENST00000318007 CSNK2A3Q8NEV1 391 aa13.13□□□□□ -0.31
PDLIM5-202ENST00000318007 PP6455Q8WZ26 134 aa13.13□□□□□ -0.31
PDLIM5-202ENST00000318007 NRGNQ92686 78 aa13.13□□□□□ -0.31
PDLIM5-202ENST00000318007 GFI1Q99684 422 aa13.13□□□□□ -0.31
PDLIM5-202ENST00000318007 SPOCK3Q9BQ16 436 aa13.13□□□□□ -0.31
PDLIM5-202ENST00000318007 SLITRK2Q9H156 845 aa13.13□□□□□ -0.31
PDLIM5-202ENST00000318007 ZNF442Q9H7R0 627 aa13.13□□□□□ -0.31
PDLIM5-202ENST00000318007 TMEM100Q9NV29 134 aa13.13□□□□□ -0.31
PDLIM5-202ENST00000318007 PLEKHB1Q9UF11 243 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-202ENST00000318007 IGLV3-9A0A075B6K5 115 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 IGHV3-13P01766 116 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 GRPP07492 148 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 SOD3P08294 240 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 SLC2A2P11168 524 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 KITLGP21583 273 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 DDOSTP39656 456 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 MMP15P51511 669 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 PAMR1Q6UXH9 720 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 LRRTM1Q86UE6 522 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 ZNF420Q8TAQ5 688 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 DGCR14Q96DF8 476 aaKnown RBP13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 GPER1Q99527 375 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 KCNK15Q9H427 330 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 DYNLRB1Q9NP97 96 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 BATF3Q9NR55 127 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 MRPL15Q9P015 296 aaKnown RBP13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 IGKV1-27A0A075B6S5 117 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 RAF1P04049 648 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 IGFBP3P17936 291 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 RAB3BP20337 219 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 BDKRB2P30411 391 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 POU3F4P49335 361 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 ZNF81P51508 661 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 CCL8P80075 99 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 METAP1DQ6UB28 335 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 GDPGP1Q6ZNW5 385 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 ITPKCQ96DU7 683 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 ELMOD3Q96FG2 381 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 RNF170Q96K19 258 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 HIST1H2AAQ96QV6 131 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 VRK1Q99986 396 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 DHRS9Q9BPW9 319 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 UFSP2Q9NUQ7 469 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 DAPK2Q9UIK4 370 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 CACNA1DQ01668 2161 aa13.12□□□□□ -0.31
PDLIM5-202ENST00000318007 ZNF732B4DXR9 585 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 M0R233 179 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 SLC22A1O15245 554 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 MAGEB3O15480 346 aa13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 TPD52L2O43399 206 aaKnown RBP13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 SPRY1O43609 319 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-202ENST00000318007 CTAG2O75638 210 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms