RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 CLDN17P56750 224 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 ACTBL2Q562R1 376 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 AVPI1Q5T686 147 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 IL22RA1Q8N6P7 574 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 AGBL5Q8NDL9 886 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 NAT6Q93015 286 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 PTX4Q96A99 478 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 EDEM2Q9BV94 578 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 UQCC1Q9NVA1 299 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 PLEK2Q9NYT0 353 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 CYB5R1Q9UHQ9 305 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 CDC14BO60729 498 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 SNRNP70P08621 437 aaKnown RBP9.31□□□□□ -0.92
COL3A1-202ENST00000317840 GSTP1P09211 210 aaKnown RBP9.31□□□□□ -0.92
COL3A1-202ENST00000317840 SRSF3P84103 164 aaKnown RBP9.31□□□□□ -0.92
COL3A1-202ENST00000317840 PJVKQ0ZLH3 352 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 MFAP5Q13361 173 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 THEM4Q5T1C6 240 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 FAHD2BQ6P2I3 314 aaPredicted RBP9.31□□□□□ -0.92
COL3A1-202ENST00000317840 PGAP1Q75T13 922 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 RNF144BQ7Z419 303 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 OR8B12Q8NGG6 310 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 FAHD2AQ96GK7 314 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 LIN37Q96GY3 246 aaPredicted RBP9.31□□□□□ -0.92
COL3A1-202ENST00000317840 KCNK17Q96T54 332 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 LPAR5Q9H1C0 372 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 ATPIF1Q9UII2 106 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 WIF1Q9Y5W5 379 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 R4GN57 208 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 A0A1W2PR77 199 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 MASP2O00187 686 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 NPIPB7O75200 414 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 ZNF205O95201 554 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 SFT2D2O95562 160 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 CCL4P13236 92 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 TAS2R46P59540 309 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 RAB5BP61020 215 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 LINC00518Q8N0U6 118 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 OR5L2Q8NGL0 311 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 OIT3Q8WWZ8 545 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 C20orf24Q9BUV8 137 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 FAM206AQ9NX38 181 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 KCNIP3Q9Y2W7 256 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 B3GALT1Q9Y5Z6 326 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 DNAJC13O75165 2243 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 FAM230AA0A1W2PPH8 454 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 ANKUB1A6NFN9 424 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 FAHP16930 419 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 OPRM1P35372 400 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 NPBWR1P48145 328 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 PRSS12P56730 875 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 CLEC9AQ6UXN8 241 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 BHLHE23Q8NDY6 225 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 C14orf79Q96F83 325 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 RRNAD1Q96FB5 475 aaKnown RBP9.3□□□□□ -0.92
COL3A1-202ENST00000317840 C2orf50Q96LR7 162 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 RGCCQ9H4X1 137 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 C5orf66Q9H5L9 145 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 ZFP57Q9NU63 452 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 OCIAD1Q9NX40 245 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 SLC2A8Q9NY64 477 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 EML5Q05BV3 1969 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 GPR85P60893 370 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 TMEM164Q5U3C3 297 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 FAM180AQ6UWF9 173 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 Q6ZRG5 221 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 HOGA1Q86XE5 327 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 ZC3H10Q96K80 434 aaKnown RBP9.3□□□□□ -0.92
COL3A1-202ENST00000317840 ZNF2Q9BSG1 426 aaPredicted RBP9.3□□□□□ -0.92
COL3A1-202ENST00000317840 MYOZ1Q9NP98 299 aaPredicted RBP9.3□□□□□ -0.92
COL3A1-202ENST00000317840 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 ZNF98A6NK75 572 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 MTRF1O75570 445 aaKnown RBP9.3□□□□□ -0.92
COL3A1-202ENST00000317840 OR2J2O76002 312 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 ZNF14P17017 642 aaPredicted RBP9.3□□□□□ -0.92
COL3A1-202ENST00000317840 RCC1P18754 421 aaPredicted RBP9.3□□□□□ -0.92
COL3A1-202ENST00000317840 KCNJ3P48549 501 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 RAB13P51153 203 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 KISS1Q15726 138 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 PCK2Q16822 640 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 PABPC1L2AQ5JQF8 200 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 PRSS54Q6PEW0 395 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 NAA40Q86UY6 237 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 UBALD2Q8IYN6 164 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 PRRG4Q9BZD6 226 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 NMES1Q9C002 83 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 MMP26Q9NRE1 261 aa9.3□□□□□ -0.92
COL3A1-202ENST00000317840 MUC22E2RYF6 1773 aaPredicted RBP9.29□□□□□ -0.92
COL3A1-202ENST00000317840 MYO7BQ6PIF6 2116 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 IGKV3D-11A0A0A0MRZ8 115 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 LIPT2A6NK58 231 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 NPIPA2E9PIF3 369 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 NPIPA3F8WFD2 350 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 LDLRAD4O15165 306 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 TCN2P20062 427 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 RPL12P30050 165 aaKnown RBP9.29□□□□□ -0.92
COL3A1-202ENST00000317840 CSNK1A1P48729 337 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 CAMLGP49069 296 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 SRYQ05066 204 aa9.29□□□□□ -0.92
COL3A1-202ENST00000317840 SP6Q3SY56 376 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms